RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 NWD1Q149M9 1564 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 BAZ2BQ9UIF8 2168 aaKnown RBP11.66□□□□□ -0.54
RTN3-208ENST00000537981 hCG_1642624A0A1W2PR95 340 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
RTN3-208ENST00000537981 GNA14O95837 355 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 PRLRP16471 622 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 ATP6V1C1P21283 382 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 RFX5P48382 616 aaPredicted RBP11.66□□□□□ -0.54
RTN3-208ENST00000537981 SESN3P58005 492 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 DBN1Q16643 649 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 IFI16Q16666 785 aaKnown RBP11.66□□□□□ -0.54
RTN3-208ENST00000537981 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 CCDC38Q502W7 563 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 LRIG3Q6UXM1 1119 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 ASRGL1Q7L266 308 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 TBC1D10CQ8IV04 446 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 FBXL16Q8N461 479 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 TEX9Q8N6V9 391 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 TMEM237Q96Q45 408 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 DDX23Q9BUQ8 820 aaKnown RBP11.66□□□□□ -0.54
RTN3-208ENST00000537981 HELLSQ9NRZ9 838 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 XIRP1Q702N8 1843 aaKnown RBP11.66□□□□□ -0.54
RTN3-208ENST00000537981 MAP3K15Q6ZN16 1313 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 IGSF1Q8N6C5 1336 aa11.66□□□□□ -0.54
RTN3-208ENST00000537981 DAPK3O43293 454 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 MMP1P03956 469 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 EIF4BP23588 611 aaKnown RBP11.65□□□□□ -0.54
RTN3-208ENST00000537981 GSTT1P30711 240 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 PIP4K2AP48426 406 aaPredicted RBP11.65□□□□□ -0.54
RTN3-208ENST00000537981 COPS2P61201 443 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 USP46P62068 366 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 MRPS35P82673 323 aaKnown RBP11.65□□□□□ -0.54
RTN3-208ENST00000537981 DHX9Q08211 1270 aaKnown RBP11.65□□□□□ -0.54
RTN3-208ENST00000537981 MGAT5Q09328 741 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 BIRC3Q13489 604 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 TRIM29Q14134 588 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 ITIH4Q14624 930 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 FAM136AQ96C01 138 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 GSDMAQ96QA5 445 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 PUS7LQ9H0K6 701 aaKnown RBP11.65□□□□□ -0.54
RTN3-208ENST00000537981 CPDO75976 1380 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 PDS5AQ29RF7 1337 aaKnown RBP11.65□□□□□ -0.54
RTN3-208ENST00000537981 PCDH11XQ9BZA7 1347 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 TLDC2A0PJX2 215 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 HNRNPRO43390 633 aaKnown RBP11.65□□□□□ -0.54
RTN3-208ENST00000537981 PALMO75781 387 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 TPBGLP0DKB5 382 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 SETSIPP0DME0 302 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 MYBP10242 640 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 SERPINB4P48594 390 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 PTDSS1P48651 473 aaKnown RBP11.65□□□□□ -0.54
RTN3-208ENST00000537981 PEX5P50542 639 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 KLC1Q07866 573 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 EHHADHQ08426 723 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 BNIP1Q12981 228 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 SPA17Q15506 151 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 PTF1AQ7RTS3 328 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 ARMC9Q7Z3E5 817 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 PALB2Q86YC2 1186 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 TLCD1Q96CP7 247 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 ORAI2Q96SN7 254 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 CELF4Q9BZC1 486 aaKnown RBP11.65□□□□□ -0.54
RTN3-208ENST00000537981 DDX47Q9H0S4 455 aaKnown RBP11.65□□□□□ -0.54
RTN3-208ENST00000537981 FGFR1OP2Q9NVK5 253 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 NUB1Q9Y5A7 615 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 CCDC61Q9Y6R9 512 aa11.65□□□□□ -0.54
RTN3-208ENST00000537981 B4E1Z4 1266 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 ASAP2O43150 1006 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 MBD4O95243 580 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 ATP11AP98196 1134 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 LBRQ14739 615 aaKnown RBP11.64□□□□□ -0.55
RTN3-208ENST00000537981 SGSM1Q2NKQ1 1148 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 EGFLAMQ63HQ2 1017 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 KANK3Q6NY19 840 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 RALYLQ86SE5 291 aaKnown RBP11.64□□□□□ -0.55
RTN3-208ENST00000537981 MGARPQ8TDB4 240 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 PBKQ96KB5 322 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 INPP4AQ96PE3 977 aaPredicted RBP11.64□□□□□ -0.55
RTN3-208ENST00000537981 TRIM31Q9BZY9 425 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 ISCUQ9H1K1 167 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 FAM170AA1A519 330 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 F8VZ95 297 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 SNX3O60493 162 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 ENTPD5O75356 428 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 ENOX2Q16206 610 aaKnown RBP11.64□□□□□ -0.55
RTN3-208ENST00000537981 AGBL2Q5U5Z8 902 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 PI16Q6UXB8 463 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 TMC3Q7Z5M5 1100 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 NCOA7Q8NI08 942 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 OPTNQ96CV9 577 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 DPH5Q9H2P9 285 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 FAM207AQ9NSI2 230 aaPredicted RBP11.64□□□□□ -0.55
RTN3-208ENST00000537981 ETNK2Q9NVF9 386 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 SAMD15Q9P1V8 674 aa11.64□□□□□ -0.55
RTN3-208ENST00000537981 MAGEC2Q9UBF1 373 aaPredicted RBP11.64□□□□□ -0.55
RTN3-208ENST00000537981 RNF113AO15541 343 aaKnown RBP11.63□□□□□ -0.55
RTN3-208ENST00000537981 HIP1RO75146 1068 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 ITGA4P13612 1032 aa11.63□□□□□ -0.55
RTN3-208ENST00000537981 CREB1P16220 341 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms