RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 UPF3BQ9BZI7 483 aaKnown RBP10.28□□□□□ -0.76
SMAD3-203ENST00000537194 LMAN2LQ9H0V9 348 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 MUC6Q6W4X9 2439 aa10.28□□□□□ -0.76
SMAD3-203ENST00000537194 SPDYE3A6NKU9 549 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 E7EWF7 191 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 CYP21A2P08686 494 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 CALM1P0DP23 149 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 CALM2P0DP24 149 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 CALM3P0DP25 149 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 SMARCA1P28370 1054 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 HOXC8P31273 242 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 MRPS9P82933 396 aaKnown RBP10.27□□□□□ -0.77
SMAD3-203ENST00000537194 TROAPQ12815 778 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 PPFIA1Q13136 1202 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 TCTN1Q2MV58 587 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 TTC22Q5TAA0 569 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 SYNE3Q6ZMZ3 975 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 EXOC6Q8TAG9 804 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 SEPT1Q8WYJ6 367 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 GPKOWQ92917 476 aaPredicted RBP eCLIP10.27□□□□□ -0.77
SMAD3-203ENST00000537194 GPRASP2Q96D09 838 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 PABPC5Q96DU9 382 aaKnown RBP10.27□□□□□ -0.77
SMAD3-203ENST00000537194 MTA3Q9BTC8 594 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 SPZ1Q9BXG8 430 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 SMARCAD1Q9H4L7 1026 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 AZI2Q9H6S1 392 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 RNF216Q9NWF9 866 aaPredicted RBP10.27□□□□□ -0.77
SMAD3-203ENST00000537194 CLDND1Q9NY35 253 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 ERAP1Q9NZ08 941 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 FRMPD4Q14CM0 1322 aa10.27□□□□□ -0.77
SMAD3-203ENST00000537194 TTC3P53804 2025 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 FAM86C2PA6NEL3 165 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 GRXCR2A6NFK2 248 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 RRN3P2A6NIE6 340 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 PRR33A8MZF0 331 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 H3BQ06 376 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-203ENST00000537194 PIK3CDO00329 1044 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 MAFGO15525 162 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 MCM5P33992 734 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 TCF7P36402 384 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-203ENST00000537194 BTG3Q14201 252 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-203ENST00000537194 TCEAL5Q5H9L2 206 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 FAM26DQ5JW98 314 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 IER5Q5VY09 327 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-203ENST00000537194 LMBR1Q8WVP7 490 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 YTHDC1Q96MU7 727 aaKnown RBP10.26□□□□□ -0.77
SMAD3-203ENST00000537194 POP1Q99575 1024 aaKnown RBP10.26□□□□□ -0.77
SMAD3-203ENST00000537194 PSTPIP2Q9H939 334 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 PRKAG3Q9UGI9 489 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 TUBE1Q9UJT0 475 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 PIEZO1Q92508 2521 aa10.26□□□□□ -0.77
SMAD3-203ENST00000537194 DCXO43602 365 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 CYTH3O43739 400 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 STAG3L1P0CL83 205 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 GHRP10912 638 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 IL9P15248 144 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 CHMLP26374 656 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 MTMR1Q13613 665 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 HIC1Q14526 733 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 GRIK4Q16099 956 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 USP17L6PQ6QN14 398 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 RPAINQ86UA6 219 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 TRIM50Q86XT4 487 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 NEK9Q8TD19 979 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 PLVAPQ9BX97 442 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 FTHL17Q9BXU8 183 aa10.25□□□□□ -0.77
SMAD3-203ENST00000537194 REV3LO60673 3130 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-203ENST00000537194 CENPBP07199 599 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-203ENST00000537194 MARK3P27448 753 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 BMPR1AP36894 532 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 IGBP1P78318 339 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 PTH1RQ03431 593 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 NAALADL2Q58DX5 795 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 ODR4Q5SWX8 454 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 TSHZ1Q6ZSZ6 1077 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 FAM43BQ6ZT52 329 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-203ENST00000537194 IGDCC4Q8TDY8 1250 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 SDF4Q9BRK5 362 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 LRFN2Q9ULH4 789 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 TRPC6Q9Y210 931 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 SLC12A7Q9Y666 1083 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 ADGRA3Q8IWK6 1321 aa10.24□□□□□ -0.77
SMAD3-203ENST00000537194 C5orf67F2Z3F1 127 aa10.23□□□□□ -0.77
SMAD3-203ENST00000537194 ENPP3O14638 875 aa10.23□□□□□ -0.77
SMAD3-203ENST00000537194 SGSM2O43147 1006 aa10.23□□□□□ -0.77
SMAD3-203ENST00000537194 PRC1O43663 620 aa10.23□□□□□ -0.77
SMAD3-203ENST00000537194 CHRNA1P02708 482 aa10.23□□□□□ -0.77
SMAD3-203ENST00000537194 HOXD11P31277 338 aaPredicted RBP10.23□□□□□ -0.77
SMAD3-203ENST00000537194 ADAM17P78536 824 aa10.23□□□□□ -0.77
SMAD3-203ENST00000537194 MRPS6P82932 125 aaKnown RBP10.23□□□□□ -0.77
SMAD3-203ENST00000537194 SEMA3FQ13275 785 aa10.23□□□□□ -0.77
SMAD3-203ENST00000537194 MKRN4PQ13434 485 aaPredicted RBP10.23□□□□□ -0.77
SMAD3-203ENST00000537194 RNF20Q5VTR2 975 aa10.23□□□□□ -0.77
SMAD3-203ENST00000537194 TEX2Q8IWB9 1127 aa10.23□□□□□ -0.77
SMAD3-203ENST00000537194 ADHFE1Q8IWW8 467 aa10.23□□□□□ -0.77
SMAD3-203ENST00000537194 MB21D2Q8IYB1 491 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms