RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 COL9A3Q14050 684 aaPredicted RBP22.61■■□□□ 1.21
TNFRSF1B-204ENST00000536782 ANO2Q9NQ90 1003 aa22.61■■□□□ 1.21
TNFRSF1B-204ENST00000536782 KAT6AQ92794 2004 aa22.6■■□□□ 1.21
TNFRSF1B-204ENST00000536782 ARHGAP4P98171 946 aa22.6■■□□□ 1.21
TNFRSF1B-204ENST00000536782 RAB11FIP4Q86YS3 637 aa22.6■■□□□ 1.21
TNFRSF1B-204ENST00000536782 CCDC82Q8N4S0 544 aa22.6■■□□□ 1.21
TNFRSF1B-204ENST00000536782 FANCBQ8NB91 859 aa22.6■■□□□ 1.21
TNFRSF1B-204ENST00000536782 LMBR1Q8WVP7 490 aa22.6■■□□□ 1.21
TNFRSF1B-204ENST00000536782 LRRC2Q9BYS8 371 aa22.6■■□□□ 1.21
TNFRSF1B-204ENST00000536782 RAPGEFL1Q9UHV5 662 aa22.6■■□□□ 1.21
TNFRSF1B-204ENST00000536782 NRCAMQ92823 1304 aa22.59■■□□□ 1.21
TNFRSF1B-204ENST00000536782 hCG_1642624A0A1W2PR95 340 aa22.59■■□□□ 1.21
TNFRSF1B-204ENST00000536782 SPDYE3A6NKU9 549 aa22.59■■□□□ 1.21
TNFRSF1B-204ENST00000536782 COL9A1P20849 921 aa22.59■■□□□ 1.21
TNFRSF1B-204ENST00000536782 TCF7P36402 384 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF1B-204ENST00000536782 ADAM17P78536 824 aa22.59■■□□□ 1.21
TNFRSF1B-204ENST00000536782 HTRA4P83105 476 aaPredicted RBP22.59■■□□□ 1.21
TNFRSF1B-204ENST00000536782 TMTC3Q6ZXV5 915 aa22.59■■□□□ 1.21
TNFRSF1B-204ENST00000536782 MYO7AQ13402 2215 aa22.59■■□□□ 1.21
TNFRSF1B-204ENST00000536782 ATP9AO75110 1047 aa22.58■■□□□ 1.21
TNFRSF1B-204ENST00000536782 KCNA2P16389 499 aa22.58■■□□□ 1.21
TNFRSF1B-204ENST00000536782 ITGB5P18084 799 aa22.58■■□□□ 1.21
TNFRSF1B-204ENST00000536782 UBE2SQ16763 222 aa22.58■■□□□ 1.21
TNFRSF1B-204ENST00000536782 SYNE3Q6ZMZ3 975 aa22.58■■□□□ 1.21
TNFRSF1B-204ENST00000536782 SGMS1Q86VZ5 419 aa22.58■■□□□ 1.21
TNFRSF1B-204ENST00000536782 MICU3Q86XE3 530 aa22.58■■□□□ 1.21
TNFRSF1B-204ENST00000536782 SEPT1Q8WYJ6 367 aa22.58■■□□□ 1.21
TNFRSF1B-204ENST00000536782 APBB2Q92870 758 aa22.58■■□□□ 1.21
TNFRSF1B-204ENST00000536782 UBIAD1Q9Y5Z9 338 aa22.58■■□□□ 1.21
TNFRSF1B-204ENST00000536782 MTMR1Q13613 665 aa22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 FAM26DQ5JW98 314 aa22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 RNF20Q5VTR2 975 aa22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 HEATR3Q7Z4Q2 680 aa22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 FBXO22Q8NEZ5 403 aa22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 SP7Q8TDD2 431 aaPredicted RBP22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 TOP1MTQ969P6 601 aa22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 C17orf80Q9BSJ5 609 aa22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 OSBPL7Q9BZF2 842 aa22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 PCDHA6Q9UN73 950 aa22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 PCDHA8Q9Y5H6 950 aa22.57■■□□□ 1.2
TNFRSF1B-204ENST00000536782 MAFGO15525 162 aa22.56■■□□□ 1.2
TNFRSF1B-204ENST00000536782 TAF2Q6P1X5 1199 aa22.56■■□□□ 1.2
TNFRSF1B-204ENST00000536782 IFIH1Q9BYX4 1025 aaKnown RBP22.56■■□□□ 1.2
TNFRSF1B-204ENST00000536782 EHMT1Q9H9B1 1298 aa22.56■■□□□ 1.2
TNFRSF1B-204ENST00000536782 ERAP1Q9NZ08 941 aa22.56■■□□□ 1.2
TNFRSF1B-204ENST00000536782 PKD2L1Q9P0L9 805 aa22.56■■□□□ 1.2
TNFRSF1B-204ENST00000536782 NLRC5Q86WI3 1866 aa22.56■■□□□ 1.2
TNFRSF1B-204ENST00000536782 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 GSTTP1A0A1W2PQM5 241 aa22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 UPP2O95045 317 aa22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 PPFIA1Q13136 1202 aa22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 RPAINQ86UA6 219 aa22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 GLG1Q92896 1179 aa22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 SAMD11Q96NU1 681 aa22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 NEK1Q96PY6 1258 aa22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 YME1L1Q96TA2 773 aa22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 JADE2Q9NQC1 790 aa22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 RBM28Q9NW13 759 aaKnown RBP22.55■■□□□ 1.2
TNFRSF1B-204ENST00000536782 MARK3P27448 753 aa22.54■■□□□ 1.2
TNFRSF1B-204ENST00000536782 BMP2KLQ5H9B9 411 aa22.54■■□□□ 1.2
TNFRSF1B-204ENST00000536782 APOA5Q6Q788 366 aa22.54■■□□□ 1.2
TNFRSF1B-204ENST00000536782 RSPH3Q86UC2 560 aa22.54■■□□□ 1.2
TNFRSF1B-204ENST00000536782 SMARCAD1Q9H4L7 1026 aa22.54■■□□□ 1.2
TNFRSF1B-204ENST00000536782 ATG2AQ2TAZ0 1938 aa22.54■■□□□ 1.2
TNFRSF1B-204ENST00000536782 CHRNA1P02708 482 aa22.53■■□□□ 1.2
TNFRSF1B-204ENST00000536782 GRIK4Q16099 956 aa22.53■■□□□ 1.2
TNFRSF1B-204ENST00000536782 WWC2Q6AWC2 1192 aa22.53■■□□□ 1.2
TNFRSF1B-204ENST00000536782 RUFY4Q6ZNE9 571 aa22.53■■□□□ 1.2
TNFRSF1B-204ENST00000536782 TUBE1Q9UJT0 475 aa22.53■■□□□ 1.2
TNFRSF1B-204ENST00000536782 NAPAP54920 295 aa22.52■■□□□ 1.2
TNFRSF1B-204ENST00000536782 EPC2Q52LR7 807 aa22.52■■□□□ 1.2
TNFRSF1B-204ENST00000536782 JPH1Q9HDC5 661 aaPredicted RBP22.52■■□□□ 1.2
TNFRSF1B-204ENST00000536782 CNTNAP5Q8WYK1 1306 aa22.52■■□□□ 1.2
TNFRSF1B-204ENST00000536782 MBLAC1A4D2B0 266 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 GHRP10912 638 aa22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 EXOSC10Q01780 885 aaKnown RBP22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 RTN1Q16799 776 aa22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 PTPROQ16827 1216 aa22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 DHX32Q7L7V1 743 aaKnown RBP22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 TEX2Q8IWB9 1127 aa22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 MRPL38Q96DV4 380 aaKnown RBP22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 MXRA8Q9BRK3 442 aa22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 UBE2ZQ9H832 354 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 RIC8AQ9NPQ8 531 aa22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 KCNH7Q9NS40 1196 aa22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 SLC9A2Q9UBY0 812 aa22.51■■□□□ 1.19
TNFRSF1B-204ENST00000536782 ZBTB43O43298 467 aa22.5■■□□□ 1.19
TNFRSF1B-204ENST00000536782 FOSP01100 380 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF1B-204ENST00000536782 MGAT3Q09327 533 aa22.5■■□□□ 1.19
TNFRSF1B-204ENST00000536782 MARCH8Q5T0T0 291 aa22.5■■□□□ 1.19
TNFRSF1B-204ENST00000536782 PPP1R18Q6NYC8 613 aa22.5■■□□□ 1.19
TNFRSF1B-204ENST00000536782 TMEM192Q8IY95 271 aa22.5■■□□□ 1.19
TNFRSF1B-204ENST00000536782 DNAJB3Q8WWF6 145 aa22.5■■□□□ 1.19
TNFRSF1B-204ENST00000536782 TCEANC2Q96MN5 208 aa22.5■■□□□ 1.19
TNFRSF1B-204ENST00000536782 AZI2Q9H6S1 392 aa22.5■■□□□ 1.19
TNFRSF1B-204ENST00000536782 BRPF3Q9ULD4 1205 aa22.5■■□□□ 1.19
TNFRSF1B-204ENST00000536782 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 RRN3P2A6NIE6 340 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 H3BNC9 293 aa22.49■■□□□ 1.19
TNFRSF1B-204ENST00000536782 hCG_1984214I3L0E3 225 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms