RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 UTP14CQ5TAP6 766 aaKnown RBP20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SEMA6BQ9H3T3 888 aa20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 RNPEPQ9H4A4 650 aa20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 C6orf50Q9HD87 102 aa20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CHD7Q9P2D1 2997 aa20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ARP10275 920 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 STK3Q13188 491 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ANKRD1Q15327 319 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 IL27Q8NEV9 243 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SEPT1Q8WYJ6 367 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 PBX4Q9BYU1 374 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 MTIF3Q9H2K0 278 aaKnown RBP20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 VPS54Q9P1Q0 977 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 MICAL3Q7RTP6 2002 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 C17orf102A2RUQ5 167 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 MEIS1O00470 390 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SELPP16109 830 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 GNA11P29992 359 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 PBX2P40425 430 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 TRAF7Q6Q0C0 670 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 LRRC8DQ7L1W4 858 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SERINC5Q86VE9 423 aa20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 REXO1Q8N1G1 1221 aaKnown RBP20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ZNF215Q9UL58 517 aaPredicted RBP20.37■□□□□ 0.85
TNFRSF1A-209ENST00000536717 PRUNE2Q8WUY3 3088 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 TMEM265A0A087WTH1 108 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 FAM86B1E9PN63 330 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 FAM86B2P0C5J1 330 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CCDC148Q8NFR7 591 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 RASGRP4Q8TDF6 673 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ATP6V0A1Q93050 837 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 AGO4Q9HCK5 861 aaKnown RBP20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 JPH1Q9HDC5 661 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SLC9A2Q9UBY0 812 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 STXBP5LQ9Y2K9 1186 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 LOXHD1Q8IVV2 1947 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SIP14410 1827 aa20.36■□□□□ 0.85
TNFRSF1A-209ENST00000536717 NFASCO94856 1347 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 RBAK-RBAKDNI3L0D1 243 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CPLX1O14810 134 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 TREHO43280 583 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CYP3A4P08684 503 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ADAM17P78536 824 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SSRP1Q08945 709 aaKnown RBP20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ITGB3BPQ13352 177 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ZNF618Q5T7W0 954 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 TRIM22Q8IYM9 498 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SH3GLB2Q9NR46 395 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SETD4Q9NVD3 440 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 TPCN1Q9ULQ1 816 aa20.35■□□□□ 0.85
TNFRSF1A-209ENST00000536717 IGLV3-22A0A075B6J6 115 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ZBBXA8MT70 800 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ST18O60284 1047 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 NBNO60934 754 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 DEXIO95424 95 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ZNF76P36508 570 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 AK2P54819 239 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SCRN1Q12765 414 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 MCTP2Q6DN12 878 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 NIPA1Q7RTP0 329 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 TIFAQ96CG3 184 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 PCYT2Q99447 389 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SLC4A7Q9Y6M7 1214 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 EVPLQ92817 2033 aa20.34■□□□□ 0.85
TNFRSF1A-209ENST00000536717 PARNO95453 639 aaKnown RBP20.33■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CXCL10P02778 98 aa20.33■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ACTN1P12814 892 aa20.33■□□□□ 0.85
TNFRSF1A-209ENST00000536717 MBTPS1Q14703 1052 aa20.33■□□□□ 0.85
TNFRSF1A-209ENST00000536717 BICD2Q8TD16 824 aa20.33■□□□□ 0.85
TNFRSF1A-209ENST00000536717 LMBR1Q8WVP7 490 aa20.33■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CDX2Q99626 313 aaPredicted RBP20.33■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SDF4Q9BRK5 362 aa20.33■□□□□ 0.85
TNFRSF1A-209ENST00000536717 FTOQ9C0B1 505 aaKnown RBP eCLIP20.33■□□□□ 0.85
TNFRSF1A-209ENST00000536717 EMSYQ7Z589 1322 aa20.33■□□□□ 0.85
TNFRSF1A-209ENST00000536717 EDIL3O43854 480 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 LGR5O75473 907 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 PLA2G4DQ86XP0 818 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 AIFM3Q96NN9 605 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 ERAP1Q9NZ08 941 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 PFKFB2O60825 505 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 MARK3P27448 753 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 THPOP40225 353 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 ACTR2P61160 394 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 CPLX2Q6PUV4 134 aaKnown RBP20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 GLG1Q92896 1179 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 SLKQ9H2G2 1235 aaPredicted RBP20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 SMARCAD1Q9H4L7 1026 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 ZNF576Q9H609 170 aa20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 YBX2Q9Y2T7 364 aaKnown RBP20.32■□□□□ 0.84
TNFRSF1A-209ENST00000536717 NRCAMQ92823 1304 aa20.31■□□□□ 0.84
TNFRSF1A-209ENST00000536717 UNC80Q8N2C7 3258 aa20.31■□□□□ 0.84
TNFRSF1A-209ENST00000536717 DHX15O43143 795 aaKnown RBP20.31■□□□□ 0.84
TNFRSF1A-209ENST00000536717 GNAT1P11488 350 aa20.31■□□□□ 0.84
TNFRSF1A-209ENST00000536717 CIITAP33076 1130 aa20.31■□□□□ 0.84
TNFRSF1A-209ENST00000536717 RABGGTBP53611 331 aa20.31■□□□□ 0.84
TNFRSF1A-209ENST00000536717 NLRP5P59047 1200 aa20.31■□□□□ 0.84
TNFRSF1A-209ENST00000536717 NPY5RQ15761 445 aa20.31■□□□□ 0.84
TNFRSF1A-209ENST00000536717 RAB30Q15771 203 aa20.31■□□□□ 0.84
TNFRSF1A-209ENST00000536717 TCTN1Q2MV58 587 aa20.31■□□□□ 0.84
TNFRSF1A-209ENST00000536717 BAIAP3O94812 1187 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms