RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PABPC1P11940 636 aaKnown RBP7.45□□□□□ -1.22
VBP1-203ENST00000535916 GLRBP48167 497 aa7.45□□□□□ -1.22
VBP1-203ENST00000535916 GPR85P60893 370 aa7.45□□□□□ -1.22
VBP1-203ENST00000535916 SPIRE1Q08AE8 756 aa7.45□□□□□ -1.22
VBP1-203ENST00000535916 SMAD2Q15796 467 aaKnown RBP7.45□□□□□ -1.22
VBP1-203ENST00000535916 SKIDA1Q1XH10 827 aa7.45□□□□□ -1.22
VBP1-203ENST00000535916 HABP4Q5JVS0 413 aaKnown RBP7.45□□□□□ -1.22
VBP1-203ENST00000535916 ZNF428Q96B54 188 aa7.45□□□□□ -1.22
VBP1-203ENST00000535916 MEGF9Q9H1U4 602 aa7.45□□□□□ -1.22
VBP1-203ENST00000535916 ZFP69BQ9UJL9 534 aa7.45□□□□□ -1.22
VBP1-203ENST00000535916 IQCA1LA6NCM1 817 aa7.44□□□□□ -1.22
VBP1-203ENST00000535916 KNG1P01042 644 aa7.44□□□□□ -1.22
VBP1-203ENST00000535916 FSHBP01225 129 aa7.44□□□□□ -1.22
VBP1-203ENST00000535916 YOD1Q5VVQ6 348 aaPredicted RBP7.44□□□□□ -1.22
VBP1-203ENST00000535916 SLFN13Q68D06 897 aa7.44□□□□□ -1.22
VBP1-203ENST00000535916 STYK1Q6J9G0 422 aa7.44□□□□□ -1.22
VBP1-203ENST00000535916 ZNF585AQ6P3V2 769 aa7.44□□□□□ -1.22
VBP1-203ENST00000535916 NSMFQ6X4W1 530 aa7.44□□□□□ -1.22
VBP1-203ENST00000535916 Q6ZUG5 572 aa7.44□□□□□ -1.22
VBP1-203ENST00000535916 SLC16A11Q8NCK7 471 aa7.44□□□□□ -1.22
VBP1-203ENST00000535916 ZFYVE21Q9BQ24 234 aa7.44□□□□□ -1.22
VBP1-203ENST00000535916 FBXO21O94952 628 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 SOD2P04179 222 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 C6P13671 934 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 CD276Q5ZPR3 534 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.43□□□□□ -1.22
VBP1-203ENST00000535916 RALYLQ86SE5 291 aaKnown RBP7.43□□□□□ -1.22
VBP1-203ENST00000535916 PALM2Q8IXS6 379 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 IFNL3Q8IZI9 196 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 STPG3Q8N7X2 389 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 SLC43A3Q8NBI5 491 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 WWC2-AS2Q96NR7 200 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 GMLQ99445 158 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 PDGFDQ9GZP0 370 aaPredicted RBP7.43□□□□□ -1.22
VBP1-203ENST00000535916 DEF6Q9H4E7 631 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 ARHGAP20Q9P2F6 1191 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 DSEQ9UL01 958 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 ASXL2Q76L83 1435 aa7.43□□□□□ -1.22
VBP1-203ENST00000535916 PATE3B3GLJ2 98 aa7.42□□□□□ -1.22
VBP1-203ENST00000535916 CNOT4O95628 575 aaKnown RBP7.42□□□□□ -1.22
VBP1-203ENST00000535916 PFKPQ01813 784 aa7.42□□□□□ -1.22
VBP1-203ENST00000535916 GPR155Q7Z3F1 870 aa7.42□□□□□ -1.22
VBP1-203ENST00000535916 ST13P5Q8NFI4 369 aaPredicted RBP7.42□□□□□ -1.22
VBP1-203ENST00000535916 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.42□□□□□ -1.223e-6■□□□□ 8.6
VBP1-203ENST00000535916 IPPKQ9H8X2 491 aa7.42□□□□□ -1.22
VBP1-203ENST00000535916 KCND1Q9NSA2 647 aa7.42□□□□□ -1.22
VBP1-203ENST00000535916 NUB1Q9Y5A7 615 aa7.42□□□□□ -1.22
VBP1-203ENST00000535916 TRAV20A0A0B4J274 112 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 ZNF839A8K0R7 811 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 ACOT7O00154 380 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 IL18BPO95998 194 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 CHGBP05060 677 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 TACR2P21452 398 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 IFRD2Q12894 506 aaPredicted RBP7.41□□□□□ -1.22
VBP1-203ENST00000535916 KCTD1Q719H9 257 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 Q8N1X5 172 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 AJUBAQ96IF1 538 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 CDK5RAP1Q96SZ6 601 aaKnown RBP7.41□□□□□ -1.22
VBP1-203ENST00000535916 CD244Q9BZW8 370 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 SCAND2PQ9GZW5 306 aaPredicted RBP7.41□□□□□ -1.22
VBP1-203ENST00000535916 SRRDQ9UH36 339 aa7.41□□□□□ -1.22
VBP1-203ENST00000535916 FAM47E-STBD1D6RA91 191 aa7.4□□□□□ -1.22
VBP1-203ENST00000535916 ENO2P09104 434 aaPredicted RBP7.4□□□□□ -1.22
VBP1-203ENST00000535916 CSF2RBP32927 897 aa7.4□□□□□ -1.22
VBP1-203ENST00000535916 SELENOPP49908 381 aa7.4□□□□□ -1.22
VBP1-203ENST00000535916 EPHA5P54756 1037 aa7.4□□□□□ -1.22
VBP1-203ENST00000535916 TCAF1Q9Y4C2 921 aa7.4□□□□□ -1.22
VBP1-203ENST00000535916 ZNF623O75123 536 aa7.39□□□□□ -1.23
VBP1-203ENST00000535916 RAB33AQ14088 237 aa7.39□□□□□ -1.23
VBP1-203ENST00000535916 R3HDM1Q15032 1099 aaKnown RBP7.39□□□□□ -1.23
VBP1-203ENST00000535916 CRIP3Q6Q6R5 217 aa7.39□□□□□ -1.23
VBP1-203ENST00000535916 LRRC47Q8N1G4 583 aaKnown RBP7.39□□□□□ -1.23
VBP1-203ENST00000535916 Q8TCH9 128 aa7.39□□□□□ -1.23
VBP1-203ENST00000535916 SH3RF2Q8TEC5 729 aa7.39□□□□□ -1.23
VBP1-203ENST00000535916 GNRHR2Q96P88 292 aa7.39□□□□□ -1.23
VBP1-203ENST00000535916 TACO1Q9BSH4 297 aaKnown RBP7.39□□□□□ -1.23
VBP1-203ENST00000535916 TRAF6Q9Y4K3 522 aa7.39□□□□□ -1.23
VBP1-203ENST00000535916 SLC4A7Q9Y6M7 1214 aa7.39□□□□□ -1.23
VBP1-203ENST00000535916 TCRBV5S4A2TA0A5A2 114 aa7.38□□□□□ -1.23
VBP1-203ENST00000535916 ALG1Q9BT22 464 aa7.38□□□□□ -1.23
VBP1-203ENST00000535916 VPS11Q9H270 941 aa7.38□□□□□ -1.23
VBP1-203ENST00000535916 SEC61A2Q9H9S3 476 aa7.38□□□□□ -1.23
VBP1-203ENST00000535916 SLC39A2Q9NP94 309 aa7.38□□□□□ -1.23
VBP1-203ENST00000535916 PTPN22Q9Y2R2 807 aa7.38□□□□□ -1.23
VBP1-203ENST00000535916 H0Y858 1186 aa7.37□□□□□ -1.23
VBP1-203ENST00000535916 MUSKO15146 869 aa7.37□□□□□ -1.23
VBP1-203ENST00000535916 SPDYAQ5MJ70 313 aa7.37□□□□□ -1.23
VBP1-203ENST00000535916 LRRC37BQ96QE4 947 aa7.37□□□□□ -1.23
VBP1-203ENST00000535916 LMF1Q96S06 567 aa7.37□□□□□ -1.23
VBP1-203ENST00000535916 ZNF747Q9BV97 191 aa7.37□□□□□ -1.23
VBP1-203ENST00000535916 KATNBL1Q9H079 304 aa7.37□□□□□ -1.23
VBP1-203ENST00000535916 SUV39H1O43463 412 aa7.36□□□□□ -1.23
VBP1-203ENST00000535916 FOXS1O43638 330 aa7.36□□□□□ -1.23
VBP1-203ENST00000535916 AMHP03971 560 aa7.36□□□□□ -1.23
VBP1-203ENST00000535916 ZNF888P0CJ79 500 aaPredicted RBP7.36□□□□□ -1.23
VBP1-203ENST00000535916 TCTN3Q6NUS6 607 aa7.36□□□□□ -1.23
VBP1-203ENST00000535916 SPATC1Q76KD6 591 aa7.36□□□□□ -1.23
VBP1-203ENST00000535916 REXO1L1PQ8IX06 675 aa7.36□□□□□ -1.23
VBP1-203ENST00000535916 IFNL2Q8IZJ0 200 aa7.36□□□□□ -1.23
VBP1-203ENST00000535916 SORCS2Q96PQ0 1159 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms