RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 GRXCR2A6NFK2 248 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 NOP56O00567 594 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 KCNA2P16389 499 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 MGAT3Q09327 533 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 CYFIP1Q7L576 1253 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 RALYLQ86SE5 291 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 NLRX1Q86UT6 975 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 FBXO22Q8NEZ5 403 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 LMBR1Q8WVP7 490 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 ZNF689Q96CS4 500 aaPredicted RBP12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 PABPC5Q96DU9 382 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 TMEM87BQ96K49 555 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 EPHX3Q9H6B9 360 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 RWDD3Q9Y3V2 267 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 UBIAD1Q9Y5Z9 338 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 TAF6LQ9Y6J9 622 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 KAT6AQ92794 2004 aa12.93□□□□□ -0.34
CLSTN3-206ENST00000535668 POTEB3A0JP26 581 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 C19orf67A6NJJ6 358 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 CHRNA1P02708 482 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 CALM1P0DP23 149 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 CALM2P0DP24 149 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 CALM3P0DP25 149 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 TMEM31Q5JXX7 168 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 MARCH8Q5T0T0 291 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 POTEBQ6S5H4 581 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 SGMS1Q86VZ5 419 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 FCHSD1Q86WN1 690 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 HOMER1Q86YM7 354 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 ZNF654Q8IZM8 581 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 RRP36Q96EU6 259 aaKnown RBP12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 C17orf80Q9BSJ5 609 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 PLVAPQ9BX97 442 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 CD320Q9NPF0 282 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 SETD4Q9NVD3 440 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 ZNF318Q5VUA4 2279 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 TRIOO75962 3097 aa12.92□□□□□ -0.34
CLSTN3-206ENST00000535668 KDM3AQ9Y4C1 1321 aa12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 ITGB5P18084 799 aa12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 CHMP4BP1P59074 171 aa12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 NAALADL2Q58DX5 795 aa12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 TMEM192Q8IY95 271 aa12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 MYOCDQ8IZQ8 938 aa12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 CTCFLQ8NI51 663 aaPredicted RBP12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 SEPT1Q8WYJ6 367 aa12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 IFIH1Q9BYX4 1025 aaKnown RBP12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 OSBPL7Q9BZF2 842 aa12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 KCNH6Q9H252 994 aa12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 ERAP1Q9NZ08 941 aa12.91□□□□□ -0.34
CLSTN3-206ENST00000535668 GSTTP1A0A1W2PQM5 241 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 RRN3P2A6NIE6 340 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 PRR33A8MZF0 331 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 MCM5P33992 734 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 BMPR1AP36894 532 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 USP17L6PQ6QN14 398 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 GJD3Q8N144 294 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 BANK1Q8NDB2 785 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 TNPO1Q92973 898 aaKnown RBP12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 CUL5Q93034 780 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 P2RX5Q93086 422 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 FAM122AQ96E09 287 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 IL17RAQ96F46 866 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 SMARCAD1Q9H4L7 1026 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 NSUN3Q9H649 340 aaKnown RBP12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 PSTPIP2Q9H939 334 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 JADE2Q9NQC1 790 aa12.9□□□□□ -0.34
CLSTN3-206ENST00000535668 NFASCO94856 1347 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 SH2B2O14492 632 aaPredicted RBP12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 ENPP3O14638 875 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 ATP9AO75110 1047 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 ATG7O95352 703 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 ALADP13716 330 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 TCF7P36402 384 aaPredicted RBP12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 LTBRP36941 435 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 SLC26A2P50443 739 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 RCAN1P53805 252 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 GPM6BQ13491 265 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 LPIN1Q14693 890 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 NECTIN1Q15223 517 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 TSGA10IPQ3SY00 556 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 FBXO47Q5MNV8 452 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 PLPPR4Q7Z2D5 763 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 RSPH3Q86UC2 560 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 SRBD1Q8N5C6 995 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 SMARCC2Q8TAQ2 1214 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 YME1L1Q96TA2 773 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 C11orf84Q9BUA3 381 aaPredicted RBP12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 FTHL17Q9BXU8 183 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 LSG1Q9H089 658 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 SEC63Q9UGP8 760 aaKnown RBP12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 FAM50BQ9Y247 325 aa12.89□□□□□ -0.35
CLSTN3-206ENST00000535668 IGKV6D-21A0A0A0MT36 114 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 hCG_1984214I3L0E3 225 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 DGKIO75912 1065 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 TRIM50Q86XT4 487 aa12.88□□□□□ -0.35
CLSTN3-206ENST00000535668 NME8Q8N427 588 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 661 ms