RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 GOPCQ9HD26 462 aa15.28■□□□□ 0.04
LPCAT3-203ENST00000535479 PKD2L1Q9P0L9 805 aa15.28■□□□□ 0.04
LPCAT3-203ENST00000535479 COL4A3BPQ9Y5P4 624 aa15.28■□□□□ 0.04
LPCAT3-203ENST00000535479 NHSL1Q5SYE7 1610 aa15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 ANO9A1A5B4 782 aa15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 GNA11P29992 359 aa15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 IKQ13123 557 aaPredicted RBP15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 SLC9C1Q4G0N8 1177 aa15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 SBK1Q52WX2 424 aa15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 RETREG2Q8NC44 543 aa15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 PIGOQ8TEQ8 1089 aa15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 PYM1Q9BRP8 204 aaKnown RBP15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 KCNQ5Q9NR82 932 aa15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 ANKRD36CQ5JPF3 1778 aa15.27■□□□□ 0.04
LPCAT3-203ENST00000535479 MED24O75448 989 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 BAG3O95817 575 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 NR1D1P20393 614 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 NR2F2P24468 414 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 LSP1P33241 339 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 KCNH2Q12809 1159 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 CPNE8Q86YQ8 564 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 FNBP4Q8N3X1 1017 aaPredicted RBP15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 FAM84AQ96KN4 292 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 MTMR9Q96QG7 549 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 PCDHA12Q9UN75 941 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 GFPT2O94808 682 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 HNRNPH1P31943 449 aaKnown RBP15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 COG2Q14746 738 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 TMEM266Q2M3C6 531 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 PRR16Q569H4 304 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 SPICE1Q8N0Z3 855 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 SCFD1Q8WVM8 642 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 DNAJC19Q96DA6 116 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 P2RX7Q99572 595 aaKnown RBP15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 JPH2Q9BR39 696 aaPredicted RBP15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 TSGA10Q9BZW7 698 aa15.27■□□□□ 0.03
LPCAT3-203ENST00000535479 FRMD3A2A2Y4 597 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 PHF20L1A8MW92 1017 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 TTI1O43156 1089 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 TCP1P17987 556 aaKnown RBP15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 ADCY1Q08828 1119 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 ASTE1Q2TB18 679 aaPredicted RBP15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 IQCEQ6IPM2 695 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 RBM46Q8TBY0 533 aaKnown RBP15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 RGL1Q9NZL6 768 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 LRP5O75197 1615 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 CENPFP49454 3210 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 RPS6KA5O75582 802 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 SLCO1A2P46721 670 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 GNAQP50148 359 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 ZC2HC1CQ53FD0 456 aaPredicted RBP15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 PHLDB2Q86SQ0 1253 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 OTUD6BQ8N6M0 293 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 U2AF1L4Q8WU68 220 aaKnown RBP15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 TSG101Q99816 390 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 JMJD4Q9H9V9 463 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 ACP6Q9NPH0 428 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 SH3GLB2Q9NR46 395 aa15.26■□□□□ 0.03
LPCAT3-203ENST00000535479 DOT1LQ8TEK3 1739 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 BUB1BO60566 1050 aaPredicted RBP15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 PLA2G4BP0C869 781 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 MCM3P25205 808 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 SLC20A2Q08357 652 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 TPTE2Q6XPS3 522 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 MLXIPLQ9NP71 852 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 DNAJC17Q9NVM6 304 aaKnown RBP15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 CNOT8Q9UFF9 292 aaKnown RBP15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 SCAF8Q9UPN6 1271 aaKnown RBP15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 CALCAP01258 141 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 NFIAQ12857 509 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 ASIC2Q16515 512 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 GLG1Q92896 1179 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 C8orf37Q96NL8 207 aa15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.25■□□□□ 0.03
LPCAT3-203ENST00000535479 UBAP1LF5GYI3 381 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 OPLAHO14841 1288 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 UAP1Q16222 522 aaPredicted RBP15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 ARHGAP44Q17R89 818 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 SFR1Q86XK3 245 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 IFT20Q8IY31 132 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 EMILIN3Q9NT22 766 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 TMOD4Q9NZQ9 345 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 FBXL5Q9UKA1 691 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 NOVA2Q9UNW9 492 aaKnown RBP15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 ATP6V0A2Q9Y487 856 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 ROBO1Q9Y6N7 1651 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 CASZ1Q86V15 1759 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 SNED1Q8TER0 1413 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 OPA1O60313 960 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 CTNNA1P35221 906 aaKnown RBP15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 HSD17B3P37058 310 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 FKBP3Q00688 224 aaKnown RBP15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 CCDC38Q502W7 563 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 ZNF746Q6NUN9 644 aaPredicted RBP15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 PALB2Q86YC2 1186 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 EFCAB13Q8IY85 973 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 GUF1Q8N442 669 aaKnown RBP15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 ZNF473Q8WTR7 871 aaKnown RBP15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 CCDC113Q9H0I3 377 aa15.24■□□□□ 0.03
LPCAT3-203ENST00000535479 CD209Q9NNX6 404 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms