RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 RSPH3Q86UC2 560 aa13.55□□□□□ -0.24
KNTC1-208ENST00000535410 ZNF274Q96GC6 653 aaPredicted RBP13.55□□□□□ -0.24
KNTC1-208ENST00000535410 CTAGE1Q96RT6 745 aa13.55□□□□□ -0.24
KNTC1-208ENST00000535410 ANO3Q9BYT9 981 aa13.55□□□□□ -0.24
KNTC1-208ENST00000535410 ZMYND12Q9H0C1 365 aa13.55□□□□□ -0.24
KNTC1-208ENST00000535410 RNPEPQ9H4A4 650 aa13.55□□□□□ -0.24
KNTC1-208ENST00000535410 JPH1Q9HDC5 661 aaPredicted RBP13.55□□□□□ -0.24
KNTC1-208ENST00000535410 KCNH7Q9NS40 1196 aa13.55□□□□□ -0.24
KNTC1-208ENST00000535410 NFASCO94856 1347 aa13.55□□□□□ -0.24
KNTC1-208ENST00000535410 NID2Q14112 1375 aa13.55□□□□□ -0.24
KNTC1-208ENST00000535410 ATP9AO75110 1047 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 IFNAR1P17181 557 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 PDIA3P30101 505 aaKnown RBP13.54□□□□□ -0.24
KNTC1-208ENST00000535410 HOXC8P31273 242 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 SREBF1P36956 1147 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 PBX2P40425 430 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 GRIN2CQ14957 1233 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 ZNF618Q5T7W0 954 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 TAF2Q6P1X5 1199 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 FAM177A1Q8N128 213 aaPredicted RBP13.54□□□□□ -0.24
KNTC1-208ENST00000535410 REXO1Q8N1G1 1221 aaKnown RBP13.54□□□□□ -0.24
KNTC1-208ENST00000535410 MAFAQ8NHW3 353 aaPredicted RBP13.54□□□□□ -0.24
KNTC1-208ENST00000535410 MYLIPQ8WY64 445 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 DHX38Q92620 1227 aaKnown RBP13.54□□□□□ -0.24
KNTC1-208ENST00000535410 C22orf23Q9BZE7 217 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 BCAS3Q9H6U6 928 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 SH3GLB2Q9NR46 395 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 SLC9A2Q9UBY0 812 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 TCEAL9Q9UHQ7 104 aa13.54□□□□□ -0.24
KNTC1-208ENST00000535410 RRN3P2A6NIE6 340 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 MEIS1O00470 390 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 LGR5O75473 907 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 CYP3A4P08684 503 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 CLK2P49760 499 aaKnown RBP13.53□□□□□ -0.24
KNTC1-208ENST00000535410 SLC26A2P50443 739 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 ARHGAP4P98171 946 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 ZNF200P98182 395 aaPredicted RBP13.53□□□□□ -0.24
KNTC1-208ENST00000535410 SSRP1Q08945 709 aaKnown RBP13.53□□□□□ -0.24
KNTC1-208ENST00000535410 TRIM71Q2Q1W2 868 aaKnown RBP13.53□□□□□ -0.24
KNTC1-208ENST00000535410 PPP2R2DQ66LE6 453 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 SEPT8Q92599 483 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 ZBED2Q9BTP6 218 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 SLC26A6Q9BXS9 759 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 NKX2-4Q9H2Z4 354 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 SETD4Q9NVD3 440 aa13.53□□□□□ -0.24
KNTC1-208ENST00000535410 GSTTP1A0A1W2PQM5 241 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 TREHO43280 583 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 NBNO60934 754 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 CDKL5O76039 1030 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 ANAPC15P60006 121 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.25
KNTC1-208ENST00000535410 SETQ01105 290 aaPredicted RBP13.52□□□□□ -0.25
KNTC1-208ENST00000535410 PPFIA1Q13136 1202 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 ANKRD1Q15327 319 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 JAKMIP3Q5VZ66 844 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 PLPPR4Q7Z2D5 763 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 RPAINQ86UA6 219 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 HERC6Q8IVU3 1022 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 VWCEQ96DN2 955 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 TBC1D22BQ9NU19 505 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.25
KNTC1-208ENST00000535410 MYH7BA7E2Y1 1941 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 TLL1O43897 1013 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 AMHP03971 560 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 STAT5BP51692 787 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 RABGGTBP53611 331 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 NLRP5P59047 1200 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 WDR5P61964 334 aaKnown RBP13.51□□□□□ -0.25
KNTC1-208ENST00000535410 PKN1Q16512 942 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 FAM160B1Q5W0V3 765 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 GALNT17Q6IS24 598 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 FAM43BQ6ZT52 329 aaPredicted RBP13.51□□□□□ -0.25
KNTC1-208ENST00000535410 PLA2G4DQ86XP0 818 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 TRIM50Q86XT4 487 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.51□□□□□ -0.25
KNTC1-208ENST00000535410 LMBR1Q8WVP7 490 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 APBB2Q92870 758 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 PHKBQ93100 1093 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 PRDM12Q9H4Q4 367 aa13.51□□□□□ -0.25
KNTC1-208ENST00000535410 AGO4Q9HCK5 861 aaKnown RBP13.51□□□□□ -0.25
KNTC1-208ENST00000535410 LAMA2P24043 3122 aaKnown RBP13.5□□□□□ -0.25
KNTC1-208ENST00000535410 DEXIO95424 95 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 XBP1P17861 261 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 USP11P51784 963 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 ACTR2P61160 394 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 NTRK3Q16288 839 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 FAM26DQ5JW98 314 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 MIS18BP1Q6P0N0 1132 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 CYP2W1Q8TAV3 490 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 RAD9AQ99638 391 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
KNTC1-208ENST00000535410 TMEM260Q9NX78 707 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 TUBE1Q9UJT0 475 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 TRPC6Q9Y210 931 aa13.5□□□□□ -0.25
KNTC1-208ENST00000535410 YBX2Q9Y2T7 364 aaKnown RBP13.5□□□□□ -0.25
KNTC1-208ENST00000535410 M0QZ92 97 aa13.49□□□□□ -0.25
KNTC1-208ENST00000535410 IPO5O00410 1097 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms