RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 KAT2BQ92831 832 aa27.34■■□□□ 1.97
SIPA1-210ENST00000534406 SEZ6LQ9BYH1 1024 aa27.34■■□□□ 1.97
SIPA1-210ENST00000534406 ARVCFO00192 962 aa27.33■■□□□ 1.97
SIPA1-210ENST00000534406 MARCH6O60337 910 aa27.33■■□□□ 1.97
SIPA1-210ENST00000534406 PSMD10O75832 226 aa27.33■■□□□ 1.97
SIPA1-210ENST00000534406 MFSD10Q14728 455 aa27.33■■□□□ 1.97
SIPA1-210ENST00000534406 TRIM50Q86XT4 487 aa27.33■■□□□ 1.97
SIPA1-210ENST00000534406 GJA10Q969M2 543 aa27.33■■□□□ 1.97
SIPA1-210ENST00000534406 C16orf70Q9BSU1 422 aa27.33■■□□□ 1.97
SIPA1-210ENST00000534406 ZNF215Q9UL58 517 aaPredicted RBP27.33■■□□□ 1.97
SIPA1-210ENST00000534406 ATP11BQ9Y2G3 1177 aa27.33■■□□□ 1.97
SIPA1-210ENST00000534406 MROH7Q68CQ1 1323 aa27.33■■□□□ 1.97
SIPA1-210ENST00000534406 EMSYQ7Z589 1322 aa27.33■■□□□ 1.97
SIPA1-210ENST00000534406 TNRC18O15417 2968 aaPredicted RBP27.33■■□□□ 1.96
SIPA1-210ENST00000534406 STX6O43752 255 aa27.32■■□□□ 1.96
SIPA1-210ENST00000534406 MCM7P33993 719 aa27.32■■□□□ 1.96
SIPA1-210ENST00000534406 PSEN2P49810 448 aa27.32■■□□□ 1.96
SIPA1-210ENST00000534406 CHMP4BP1P59074 171 aa27.32■■□□□ 1.96
SIPA1-210ENST00000534406 CALCRLQ16602 461 aa27.32■■□□□ 1.96
SIPA1-210ENST00000534406 BRAPQ7Z569 592 aa27.32■■□□□ 1.96
SIPA1-210ENST00000534406 SMAP1Q8IYB5 467 aaPredicted RBP27.32■■□□□ 1.96
SIPA1-210ENST00000534406 SLFN12Q8IYM2 578 aa27.32■■□□□ 1.96
SIPA1-210ENST00000534406 DPF3Q92784 378 aa27.32■■□□□ 1.96
SIPA1-210ENST00000534406 GRIN2DO15399 1336 aa27.32■■□□□ 1.96
SIPA1-210ENST00000534406 WDR64B1ANS9 1081 aa27.31■■□□□ 1.96
SIPA1-210ENST00000534406 BAG4O95429 457 aaKnown RBP27.31■■□□□ 1.96
SIPA1-210ENST00000534406 KIAA0753Q2KHM9 967 aa27.31■■□□□ 1.96
SIPA1-210ENST00000534406 NBPF20Q3BBV1 942 aa27.31■■□□□ 1.96
SIPA1-210ENST00000534406 MIS18BP1Q6P0N0 1132 aa27.31■■□□□ 1.96
SIPA1-210ENST00000534406 NFRKBQ6P4R8 1299 aa27.31■■□□□ 1.96
SIPA1-210ENST00000534406 FERMT3Q86UX7 667 aa27.31■■□□□ 1.96
SIPA1-210ENST00000534406 SLC43A3Q8NBI5 491 aa27.31■■□□□ 1.96
SIPA1-210ENST00000534406 AZI2Q9H6S1 392 aa27.31■■□□□ 1.96
SIPA1-210ENST00000534406 MTMR6Q9Y217 621 aa27.31■■□□□ 1.96
SIPA1-210ENST00000534406 H3BRB1 525 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 HAS3O00219 553 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 CHMP2AO43633 222 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 EVI5O60447 810 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 PQBP1O60828 265 aaKnown RBP27.3■■□□□ 1.96
SIPA1-210ENST00000534406 LGR5O75473 907 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 ATG7O95352 703 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 SUPT20HL2P0C7V6 817 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 RILPL1Q5EBL4 403 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 FAM47CQ5HY64 1035 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 HAS1Q92839 578 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 GLG1Q92896 1179 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 UNC45AQ9H3U1 944 aa27.3■■□□□ 1.96
SIPA1-210ENST00000534406 TUT1Q9H6E5 874 aaKnown RBP27.3■■□□□ 1.96
SIPA1-210ENST00000534406 CDK7P50613 346 aa27.29■■□□□ 1.96
SIPA1-210ENST00000534406 TOB1P50616 345 aaPredicted RBP27.29■■□□□ 1.96
SIPA1-210ENST00000534406 JAK3P52333 1124 aa27.29■■□□□ 1.96
SIPA1-210ENST00000534406 NBR1Q14596 966 aa27.29■■□□□ 1.96
SIPA1-210ENST00000534406 ZNF174Q15697 407 aa27.29■■□□□ 1.96
SIPA1-210ENST00000534406 ABHD15Q6UXT9 468 aa27.29■■□□□ 1.96
SIPA1-210ENST00000534406 ANKRD33Q7Z3H0 272 aa27.29■■□□□ 1.96
SIPA1-210ENST00000534406 C7orf61Q8IZ16 206 aa27.29■■□□□ 1.96
SIPA1-210ENST00000534406 SMARCAD1Q9H4L7 1026 aa27.29■■□□□ 1.96
SIPA1-210ENST00000534406 VAV3Q9UKW4 847 aa27.29■■□□□ 1.96
SIPA1-210ENST00000534406 SAMM50Q9Y512 469 aa27.29■■□□□ 1.96
SIPA1-210ENST00000534406 WDR81Q562E7 1941 aa27.28■■□□□ 1.96
SIPA1-210ENST00000534406 BACH1O14867 736 aa27.28■■□□□ 1.96
SIPA1-210ENST00000534406 PDIA4P13667 645 aaKnown RBP27.28■■□□□ 1.96
SIPA1-210ENST00000534406 SFNP31947 248 aa27.28■■□□□ 1.96
SIPA1-210ENST00000534406 TLE2Q04725 743 aa27.28■■□□□ 1.96
SIPA1-210ENST00000534406 FAM160B1Q5W0V3 765 aa27.28■■□□□ 1.96
SIPA1-210ENST00000534406 RDM1Q8NG50 284 aa27.28■■□□□ 1.96
SIPA1-210ENST00000534406 PCYT2Q99447 389 aa27.28■■□□□ 1.96
SIPA1-210ENST00000534406 TMEM60Q9H2L4 133 aa27.28■■□□□ 1.96
SIPA1-210ENST00000534406 DISC1Q9NRI5 854 aa27.28■■□□□ 1.96
SIPA1-210ENST00000534406 PCDHA10Q9Y5I2 948 aa27.28■■□□□ 1.96
SIPA1-210ENST00000534406 MYH9P35579 1960 aaKnown RBP27.28■■□□□ 1.96
SIPA1-210ENST00000534406 DCDC2CA8MYV0 355 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 PSAPP07602 524 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 OR52Z1P0C646 297 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 PTPN11Q06124 597 aaPredicted RBP27.27■■□□□ 1.96
SIPA1-210ENST00000534406 RESTQ13127 1097 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 PPP2R5CQ13362 524 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 B3GNT9Q6UX72 402 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 MIER3Q7Z3K6 550 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 SESTD1Q86VW0 696 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 FAM126BQ8IXS8 530 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 C7orf31Q8N865 590 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 PPP1R13LQ8WUF5 828 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 TOX2Q96NM4 488 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 MTMR9Q96QG7 549 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 ERAP1Q9NZ08 941 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 PCDHB6Q9Y5E3 794 aa27.27■■□□□ 1.96
SIPA1-210ENST00000534406 IGKV6D-21A0A0A0MT36 114 aa27.26■■□□□ 1.95
SIPA1-210ENST00000534406 TLR3O15455 904 aaKnown RBP27.26■■□□□ 1.95
SIPA1-210ENST00000534406 STAT5BP51692 787 aa27.26■■□□□ 1.95
SIPA1-210ENST00000534406 PLPPR4Q7Z2D5 763 aa27.26■■□□□ 1.95
SIPA1-210ENST00000534406 CCDC60Q8IWA6 550 aaPredicted RBP27.26■■□□□ 1.95
SIPA1-210ENST00000534406 AFAP1L1Q8TED9 768 aa27.26■■□□□ 1.95
SIPA1-210ENST00000534406 MARK3P27448 753 aa27.25■■□□□ 1.95
SIPA1-210ENST00000534406 ZNF302Q9NR11 478 aa27.25■■□□□ 1.95
SIPA1-210ENST00000534406 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.25■■□□□ 1.95
SIPA1-210ENST00000534406 NR2E3Q9Y5X4 410 aa27.25■■□□□ 1.95
SIPA1-210ENST00000534406 IGSF9BQ9UPX0 1349 aa27.24■■□□□ 1.95
SIPA1-210ENST00000534406 CLTBP09497 229 aa27.24■■□□□ 1.95
SIPA1-210ENST00000534406 SMIM10L2AP0DMW4 78 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms