RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	LINC01553	A4QN01	128 aa		27.84	■■■□□ 2.05
RELA-223	ENST00000534283	TNFRSF10A	O00220	468 aa		27.84	■■■□□ 2.05
RELA-223	ENST00000534283	BMP1	P13497	986 aa		27.84	■■■□□ 2.05
RELA-223	ENST00000534283	TCF7	P36402	384 aa	Predicted RBP	27.84	■■■□□ 2.05
RELA-223	ENST00000534283	TFF2	Q03403	129 aa		27.84	■■■□□ 2.05
RELA-223	ENST00000534283	ADCK5	Q3MIX3	580 aa		27.84	■■■□□ 2.05
RELA-223	ENST00000534283	WWC2	Q6AWC2	1192 aa		27.84	■■■□□ 2.05
RELA-223	ENST00000534283	ADAMTS19	Q8TE59	1207 aa		27.84	■■■□□ 2.05
RELA-223	ENST00000534283	SEPT1	Q8WYJ6	367 aa		27.84	■■■□□ 2.05
RELA-223	ENST00000534283	TCEANC2	Q96MN5	208 aa		27.84	■■■□□ 2.05
RELA-223	ENST00000534283	HTRA4	P83105	476 aa	Predicted RBP	27.83	■■■□□ 2.05
RELA-223	ENST00000534283	FAM117B	Q6P1L5	589 aa		27.83	■■■□□ 2.05
RELA-223	ENST00000534283	SUGCT	Q9HAC7	445 aa		27.83	■■■□□ 2.05
RELA-223	ENST00000534283	FAM217B	Q9NTX9	383 aa	Predicted RBP	27.83	■■■□□ 2.05
RELA-223	ENST00000534283	CNTNAP5	Q8WYK1	1306 aa		27.83	■■■□□ 2.05
RELA-223	ENST00000534283	NRCAM	Q92823	1304 aa		27.83	■■■□□ 2.05
RELA-223	ENST00000534283	SPDYE3	A6NKU9	549 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	MAFG	O15525	162 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	CTSH	P09668	335 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	ARHGAP4	P98171	946 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	MTMR1	Q13613	665 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	SYNE3	Q6ZMZ3	975 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	RPAIN	Q86UA6	219 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	SEPT8	Q92599	483 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	TGS1	Q96RS0	853 aa	Known RBP	27.82	■■■□□ 2.04
RELA-223	ENST00000534283	RBM28	Q9NW13	759 aa	Known RBP	27.82	■■■□□ 2.04
RELA-223	ENST00000534283	LMCD1	Q9NZU5	365 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	INSL6	Q9Y581	213 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	MYH7B	A7E2Y1	1941 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	XIRP2	A4UGR9	3374 aa		27.82	■■■□□ 2.04
RELA-223	ENST00000534283	AMH	P03971	560 aa		27.81	■■■□□ 2.04
RELA-223	ENST00000534283	TEX2	Q8IWB9	1127 aa		27.81	■■■□□ 2.04
RELA-223	ENST00000534283	SP7	Q8TDD2	431 aa	Predicted RBP	27.81	■■■□□ 2.04
RELA-223	ENST00000534283		V9GY48	417 aa	Predicted RBP	27.81	■■■□□ 2.04
RELA-223	ENST00000534283	PRRC2B	Q5JSZ5	2229 aa	Known RBP	27.8	■■■□□ 2.04
RELA-223	ENST00000534283	REV3L	O60673	3130 aa		27.8	■■■□□ 2.04
RELA-223	ENST00000534283	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	27.8	■■■□□ 2.04
RELA-223	ENST00000534283	CHRNA1	P02708	482 aa		27.8	■■■□□ 2.04
RELA-223	ENST00000534283	RTN1	Q16799	776 aa		27.8	■■■□□ 2.04
RELA-223	ENST00000534283	RUFY4	Q6ZNE9	571 aa		27.8	■■■□□ 2.04
RELA-223	ENST00000534283	CYP2W1	Q8TAV3	490 aa		27.8	■■■□□ 2.04
RELA-223	ENST00000534283	GDPD5	Q8WTR4	605 aa		27.8	■■■□□ 2.04
RELA-223	ENST00000534283	RIC8A	Q9NPQ8	531 aa		27.8	■■■□□ 2.04
RELA-223	ENST00000534283	PTPRS	Q13332	1948 aa		27.79	■■■□□ 2.04
RELA-223	ENST00000534283	ZBTB43	O43298	467 aa		27.79	■■■□□ 2.04
RELA-223	ENST00000534283	SKIV2L	Q15477	1246 aa	Known RBP	27.79	■■■□□ 2.04
RELA-223	ENST00000534283	MARCH8	Q5T0T0	291 aa		27.79	■■■□□ 2.04
RELA-223	ENST00000534283	MYOCD	Q8IZQ8	938 aa		27.79	■■■□□ 2.04
RELA-223	ENST00000534283	KCNB2	Q92953	911 aa		27.79	■■■□□ 2.04
RELA-223	ENST00000534283	TOP1MT	Q969P6	601 aa		27.79	■■■□□ 2.04
RELA-223	ENST00000534283	UHRF1	Q96T88	793 aa	Predicted RBP	27.79	■■■□□ 2.04
RELA-223	ENST00000534283	PCYT2	Q99447	389 aa		27.79	■■■□□ 2.04
RELA-223	ENST00000534283	MXRA8	Q9BRK3	442 aa		27.79	■■■□□ 2.04
RELA-223	ENST00000534283	PKD2L1	Q9P0L9	805 aa		27.79	■■■□□ 2.04
RELA-223	ENST00000534283	MBLAC1	A4D2B0	266 aa	Predicted RBP	27.78	■■■□□ 2.04
RELA-223	ENST00000534283	STXBP3	O00186	592 aa		27.78	■■■□□ 2.04
RELA-223	ENST00000534283	CDC45	O75419	566 aa		27.78	■■■□□ 2.04
RELA-223	ENST00000534283	PPP1R18	Q6NYC8	613 aa		27.78	■■■□□ 2.04
RELA-223	ENST00000534283	EHMT1	Q9H9B1	1298 aa		27.78	■■■□□ 2.04
RELA-223	ENST00000534283	KCNH7	Q9NS40	1196 aa		27.78	■■■□□ 2.04
RELA-223	ENST00000534283	ERAP1	Q9NZ08	941 aa		27.78	■■■□□ 2.04
RELA-223	ENST00000534283	MTUS1	Q9ULD2	1270 aa		27.78	■■■□□ 2.04
RELA-223	ENST00000534283	COG5	Q9UP83	839 aa		27.78	■■■□□ 2.04
RELA-223	ENST00000534283	CDC27	P30260	824 aa		27.77	■■■□□ 2.04
RELA-223	ENST00000534283	KCNQ1	P51787	676 aa		27.77	■■■□□ 2.04
RELA-223	ENST00000534283	MGAT3	Q09327	533 aa		27.77	■■■□□ 2.04
RELA-223	ENST00000534283	PPFIA1	Q13136	1202 aa		27.77	■■■□□ 2.04
RELA-223	ENST00000534283	KRT32	Q14532	448 aa		27.77	■■■□□ 2.04
RELA-223	ENST00000534283	TAF2	Q6P1X5	1199 aa		27.77	■■■□□ 2.04
RELA-223	ENST00000534283	SMARCAD1	Q9H4L7	1026 aa		27.77	■■■□□ 2.04
RELA-223	ENST00000534283	MARK3	P27448	753 aa		27.76	■■■□□ 2.03
RELA-223	ENST00000534283	RCAN1	P53805	252 aa		27.76	■■■□□ 2.03
RELA-223	ENST00000534283	NAPA	P54920	295 aa		27.76	■■■□□ 2.03
RELA-223	ENST00000534283	GRIK4	Q16099	956 aa		27.76	■■■□□ 2.03
RELA-223	ENST00000534283	AAK1	Q2M2I8	961 aa		27.76	■■■□□ 2.03
RELA-223	ENST00000534283	PGBD1	Q96JS3	809 aa		27.76	■■■□□ 2.03
RELA-223	ENST00000534283	C17orf80	Q9BSJ5	609 aa		27.76	■■■□□ 2.03
RELA-223	ENST00000534283	BARHL2	Q9NY43	387 aa		27.76	■■■□□ 2.03
RELA-223	ENST00000534283	KLF18	A0A0U1RQI7	1052 aa		27.75	■■■□□ 2.03
RELA-223	ENST00000534283	FOS	P01100	380 aa	Predicted RBP	27.75	■■■□□ 2.03
RELA-223	ENST00000534283	AR	P10275	920 aa		27.75	■■■□□ 2.03
RELA-223	ENST00000534283	CLK2	P49760	499 aa	Known RBP	27.75	■■■□□ 2.03
RELA-223	ENST00000534283	APBB2	Q92870	758 aa		27.75	■■■□□ 2.03
RELA-223	ENST00000534283	GLG1	Q92896	1179 aa		27.75	■■■□□ 2.03
RELA-223	ENST00000534283	NECAB3	Q96P71	396 aa	Predicted RBP	27.75	■■■□□ 2.03
RELA-223	ENST00000534283	JPH1	Q9HDC5	661 aa	Predicted RBP	27.75	■■■□□ 2.03
RELA-223	ENST00000534283	NFASC	O94856	1347 aa		27.74	■■■□□ 2.03
RELA-223	ENST00000534283	SMCO2	A6NFE2	343 aa		27.74	■■■□□ 2.03
RELA-223	ENST00000534283	GOLGA8A	A7E2F4	631 aa		27.74	■■■□□ 2.03
RELA-223	ENST00000534283	GOLGA8B	A8MQT2	603 aa		27.74	■■■□□ 2.03
RELA-223	ENST00000534283	hCG_1984214	I3L0E3	225 aa		27.74	■■■□□ 2.03
RELA-223	ENST00000534283	MEIS1	O00470	390 aa		27.74	■■■□□ 2.03
RELA-223	ENST00000534283	ADCY7	P51828	1080 aa		27.74	■■■□□ 2.03
RELA-223	ENST00000534283	ZNF713	Q8N859	430 aa	Predicted RBP	27.74	■■■□□ 2.03
RELA-223	ENST00000534283	HLA-C	Q95604	372 aa		27.74	■■■□□ 2.03
RELA-223	ENST00000534283	IFIH1	Q9BYX4	1025 aa	Known RBP	27.74	■■■□□ 2.03
RELA-223	ENST00000534283	SLC9A2	Q9UBY0	812 aa		27.74	■■■□□ 2.03
RELA-223	ENST00000534283	HMGB1	P09429	215 aa	Known RBP	27.73	■■■□□ 2.03
RELA-223	ENST00000534283	ITGB3BP	Q13352	177 aa	Predicted RBP	27.73	■■■□□ 2.03
RELA-223	ENST00000534283	LPIN1	Q14693	890 aa		27.73	■■■□□ 2.03

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