RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 CNKSR3Q6P9H4 555 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 CPLX2Q6PUV4 134 aaKnown RBP21.65■■□□□ 1.06
LRRK1-210ENST00000534045 SERINC5Q86VE9 423 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 TRIM50Q86XT4 487 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 TRIM22Q8IYM9 498 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 BICD2Q8TD16 824 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 PHKBQ93100 1093 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 VWCEQ96DN2 955 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 ZBED2Q9BTP6 218 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 SMARCAD1Q9H4L7 1026 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 JPH1Q9HDC5 661 aaPredicted RBP21.65■■□□□ 1.06
LRRK1-210ENST00000534045 ERAP1Q9NZ08 941 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 EMSYQ7Z589 1322 aa21.64■■□□□ 1.05
LRRK1-210ENST00000534045 LAMA2P24043 3122 aaKnown RBP21.64■■□□□ 1.05
LRRK1-210ENST00000534045 EIF5BO60841 1220 aaKnown RBP21.64■■□□□ 1.05
LRRK1-210ENST00000534045 IKBKEQ14164 716 aa21.64■■□□□ 1.05
LRRK1-210ENST00000534045 PPP2R2DQ66LE6 453 aa21.64■■□□□ 1.05
LRRK1-210ENST00000534045 RNF26Q9BY78 433 aaPredicted RBP21.64■■□□□ 1.05
LRRK1-210ENST00000534045 TM6SF1Q9BZW5 370 aa21.64■■□□□ 1.05
LRRK1-210ENST00000534045 SLC9A2Q9UBY0 812 aa21.64■■□□□ 1.05
LRRK1-210ENST00000534045 NRCAMQ92823 1304 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 EFCAB14O75071 495 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 PPFIA3O75145 1194 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 MARK3P27448 753 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 SREBF1P36956 1147 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 SSRP1Q08945 709 aaKnown RBP21.63■■□□□ 1.05
LRRK1-210ENST00000534045 REXO1Q8N1G1 1221 aaKnown RBP21.63■■□□□ 1.05
LRRK1-210ENST00000534045 CCDC148Q8NFR7 591 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 CYP2W1Q8TAV3 490 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 UPF3BQ9BZI7 483 aaKnown RBP21.63■■□□□ 1.05
LRRK1-210ENST00000534045 ZMYND12Q9H0C1 365 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 PRDM12Q9H4Q4 367 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 PDRG1Q9NUG6 133 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 YBX2Q9Y2T7 364 aaKnown RBP21.63■■□□□ 1.05
LRRK1-210ENST00000534045 TELO2Q9Y4R8 837 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 KAT6AQ92794 2004 aa21.63■■□□□ 1.05
LRRK1-210ENST00000534045 ABHD14A-ACY1A0A1B0GW23 586 aa21.62■■□□□ 1.05
LRRK1-210ENST00000534045 GSTTP1A0A1W2PQM5 241 aa21.62■■□□□ 1.05
LRRK1-210ENST00000534045 ESYT2A0FGR8 921 aa21.62■■□□□ 1.05
LRRK1-210ENST00000534045 NBNO60934 754 aa21.62■■□□□ 1.05
LRRK1-210ENST00000534045 ARP10275 920 aa21.62■■□□□ 1.05
LRRK1-210ENST00000534045 IFNAR1P17181 557 aa21.62■■□□□ 1.05
LRRK1-210ENST00000534045 HIC1Q14526 733 aa21.62■■□□□ 1.05
LRRK1-210ENST00000534045 NCOA5Q9HCD5 579 aaKnown RBP21.62■■□□□ 1.05
LRRK1-210ENST00000534045 MEIS1O00470 390 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 CAND2O75155 1236 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 LGR5O75473 907 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 CXCL10P02778 98 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 MYOGP15173 224 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 IGFBP4P22692 258 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 CLK2P49760 499 aaKnown RBP21.61■■□□□ 1.05
LRRK1-210ENST00000534045 EVCP57679 992 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 NLRP5P59047 1200 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 PPFIA1Q13136 1202 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 TRIM71Q2Q1W2 868 aaKnown RBP21.61■■□□□ 1.05
LRRK1-210ENST00000534045 RSPH3Q86UC2 560 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 PLA2G4DQ86XP0 818 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 HERC6Q8IVU3 1022 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 WNT8BQ93098 351 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 ZNF274Q96GC6 653 aaPredicted RBP21.61■■□□□ 1.05
LRRK1-210ENST00000534045 TCEAL9Q9UHQ7 104 aa21.61■■□□□ 1.05
LRRK1-210ENST00000534045 NFASCO94856 1347 aa21.6■■□□□ 1.05
LRRK1-210ENST00000534045 TLL1O43897 1013 aa21.6■■□□□ 1.05
LRRK1-210ENST00000534045 CTSHP09668 335 aa21.6■■□□□ 1.05
LRRK1-210ENST00000534045 STK3Q13188 491 aa21.6■■□□□ 1.05
LRRK1-210ENST00000534045 PKN1Q16512 942 aa21.6■■□□□ 1.05
LRRK1-210ENST00000534045 NIPA1Q7RTP0 329 aa21.6■■□□□ 1.05
LRRK1-210ENST00000534045 LMBR1Q8WVP7 490 aa21.6■■□□□ 1.05
LRRK1-210ENST00000534045 LARP6Q9BRS8 491 aaKnown RBP21.6■■□□□ 1.05
LRRK1-210ENST00000534045 AGO4Q9HCK5 861 aaKnown RBP21.6■■□□□ 1.05
LRRK1-210ENST00000534045 HOXC8P31273 242 aa21.59■■□□□ 1.05
LRRK1-210ENST00000534045 ACTR2P61160 394 aa21.59■■□□□ 1.05
LRRK1-210ENST00000534045 WDR5P61964 334 aaKnown RBP21.59■■□□□ 1.05
LRRK1-210ENST00000534045 IGBP1P78318 339 aa21.59■■□□□ 1.05
LRRK1-210ENST00000534045 TOB2Q14106 344 aaPredicted RBP21.59■■□□□ 1.05
LRRK1-210ENST00000534045 GPNMBQ14956 572 aa21.59■■□□□ 1.05
LRRK1-210ENST00000534045 NTRK3Q16288 839 aa21.59■■□□□ 1.05
LRRK1-210ENST00000534045 TAF2Q6P1X5 1199 aa21.59■■□□□ 1.05
LRRK1-210ENST00000534045 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.59■■□□□ 1.05
LRRK1-210ENST00000534045 SEPT8Q92599 483 aa21.59■■□□□ 1.05
LRRK1-210ENST00000534045 TRPC6Q9Y210 931 aa21.59■■□□□ 1.05
LRRK1-210ENST00000534045 NID2Q14112 1375 aa21.59■■□□□ 1.05
LRRK1-210ENST00000534045 RRN3P2A6NIE6 340 aa21.58■■□□□ 1.05
LRRK1-210ENST00000534045 DDX39AO00148 427 aaKnown RBP21.58■■□□□ 1.05
LRRK1-210ENST00000534045 BACH1O14867 736 aa21.58■■□□□ 1.05
LRRK1-210ENST00000534045 CA3P07451 260 aa21.58■■□□□ 1.05
LRRK1-210ENST00000534045 STAT5BP51692 787 aa21.58■■□□□ 1.05
LRRK1-210ENST00000534045 GRIK4Q16099 956 aa21.58■■□□□ 1.05
LRRK1-210ENST00000534045 DBF4BQ8NFT6 615 aa21.58■■□□□ 1.05
LRRK1-210ENST00000534045 PPM1EQ8WY54 764 aa21.58■■□□□ 1.05
LRRK1-210ENST00000534045 ZNF577Q9BSK1 485 aa21.58■■□□□ 1.05
LRRK1-210ENST00000534045 SH3GLB2Q9NR46 395 aa21.58■■□□□ 1.05
LRRK1-210ENST00000534045 VPS54Q9P1Q0 977 aa21.58■■□□□ 1.05
LRRK1-210ENST00000534045 CYP3A4P08684 503 aa21.57■■□□□ 1.04
LRRK1-210ENST00000534045 FAM160B1Q5W0V3 765 aa21.57■■□□□ 1.04
LRRK1-210ENST00000534045 TRAF7Q6Q0C0 670 aa21.57■■□□□ 1.04
LRRK1-210ENST00000534045 TUBE1Q9UJT0 475 aa21.57■■□□□ 1.04
LRRK1-210ENST00000534045 FAM86B1E9PN63 330 aa21.56■■□□□ 1.04
LRRK1-210ENST00000534045 IPO5O00410 1097 aaKnown RBP21.56■■□□□ 1.04
LRRK1-210ENST00000534045 DLL1O00548 723 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms