RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 RETREG2Q8NC44 543 aa10.64□□□□□ -0.71
ZNF250-209ENST00000533543 HERVK_113Q902F9 699 aa10.64□□□□□ -0.71
ZNF250-209ENST00000533543 DHX38Q92620 1227 aaKnown RBP10.64□□□□□ -0.71
ZNF250-209ENST00000533543 VWCEQ96DN2 955 aa10.64□□□□□ -0.71
ZNF250-209ENST00000533543 CDHR1Q96JP9 859 aa10.64□□□□□ -0.71
ZNF250-209ENST00000533543 FAM161BQ96MY7 647 aa10.64□□□□□ -0.71
ZNF250-209ENST00000533543 SLC26A6Q9BXS9 759 aa10.64□□□□□ -0.71
ZNF250-209ENST00000533543 GLT8D2Q9H1C3 349 aa10.64□□□□□ -0.71
ZNF250-209ENST00000533543 JADE2Q9NQC1 790 aa10.64□□□□□ -0.71
ZNF250-209ENST00000533543 PDRG1Q9NUG6 133 aa10.64□□□□□ -0.71
ZNF250-209ENST00000533543 CXXC1Q9P0U4 656 aaPredicted RBP10.64□□□□□ -0.71
ZNF250-209ENST00000533543 MYH7BA7E2Y1 1941 aa10.64□□□□□ -0.71
ZNF250-209ENST00000533543 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.63□□□□□ -0.71
ZNF250-209ENST00000533543 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.63□□□□□ -0.71
ZNF250-209ENST00000533543 GRXCR1A8MXD5 290 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 H3BRB1 525 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 ADAMTS3O15072 1205 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 FOSP01100 380 aaPredicted RBP10.63□□□□□ -0.71
ZNF250-209ENST00000533543 IQCF3P0C7M6 154 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 IFNAR1P17181 557 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 STK3Q13188 491 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 AP3B2Q13367 1082 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 MTMR1Q13613 665 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 HIC1Q14526 733 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 TEX2Q8IWB9 1127 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 RPUSD2Q8IZ73 545 aaKnown RBP10.63□□□□□ -0.71
ZNF250-209ENST00000533543 CYP2W1Q8TAV3 490 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 CAGE1Q8TC20 777 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 MXRA8Q9BRK3 442 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 RNF26Q9BY78 433 aaPredicted RBP10.63□□□□□ -0.71
ZNF250-209ENST00000533543 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
ZNF250-209ENST00000533543 MTMR10Q9NXD2 777 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 CDH23Q9H251 3354 aa10.63□□□□□ -0.71
ZNF250-209ENST00000533543 ESYT2A0FGR8 921 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 C17orf102A2RUQ5 167 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 RBAK-RBAKDNI3L0D1 243 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 SMIM10L2AP0DMW4 78 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 SMIM10L2BP0DMW5 78 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 ARP10275 920 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 RFC2P35250 354 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 SREBF1P36956 1147 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 CEP55Q53EZ4 464 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 CCDC155Q8N6L0 562 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 GIMAP8Q8ND71 665 aaPredicted RBP10.62□□□□□ -0.71
ZNF250-209ENST00000533543 RASGRP4Q8TDF6 673 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 AFAP1L1Q8TED9 768 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 CCDC12Q8WUD4 166 aaPredicted RBP10.62□□□□□ -0.71
ZNF250-209ENST00000533543 WNT8BQ93098 351 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 ZNF274Q96GC6 653 aaPredicted RBP10.62□□□□□ -0.71
ZNF250-209ENST00000533543 GUCD1Q96NT3 240 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 ZMYND12Q9H0C1 365 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 MTIF3Q9H2K0 278 aaKnown RBP10.62□□□□□ -0.71
ZNF250-209ENST00000533543 TTYH1Q9H313 450 aaPredicted RBP10.62□□□□□ -0.71
ZNF250-209ENST00000533543 C6orf50Q9HD87 102 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 KCNH7Q9NS40 1196 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 VPS54Q9P1Q0 977 aa10.62□□□□□ -0.71
ZNF250-209ENST00000533543 GSTTP1A0A1W2PQM5 241 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 ZBBXA8MT70 800 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 CPLX1O14810 134 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 MAFGO15525 162 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 PFKMP08237 780 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 CKBP12277 381 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 SELPP16109 830 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 DNAJB2P25686 324 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 GNA11P29992 359 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 TCF7P36402 384 aaPredicted RBP10.61□□□□□ -0.71
ZNF250-209ENST00000533543 ZNF76P36508 570 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 PBX2P40425 430 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 ANAPC15P60006 121 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 ARHGAP4P98171 946 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 SSRP1Q08945 709 aaKnown RBP10.61□□□□□ -0.71
ZNF250-209ENST00000533543 RBL2Q08999 1139 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 PTK7Q13308 1070 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 TRIM71Q2Q1W2 868 aaKnown RBP10.61□□□□□ -0.71
ZNF250-209ENST00000533543 LRRC8DQ7L1W4 858 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 REXO1Q8N1G1 1221 aaKnown RBP10.61□□□□□ -0.71
ZNF250-209ENST00000533543 CCDC148Q8NFR7 591 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 PBX4Q9BYU1 374 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 FTOQ9C0B1 505 aaKnown RBP eCLIP10.61□□□□□ -0.71
ZNF250-209ENST00000533543 SEMA6BQ9H3T3 888 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 RNPEPQ9H4A4 650 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 JPH1Q9HDC5 661 aaPredicted RBP10.61□□□□□ -0.71
ZNF250-209ENST00000533543 ZNF215Q9UL58 517 aaPredicted RBP10.61□□□□□ -0.71
ZNF250-209ENST00000533543 RBM19Q9Y4C8 960 aaKnown RBP10.61□□□□□ -0.71
ZNF250-209ENST00000533543 DOCK5Q9H7D0 1870 aa10.61□□□□□ -0.71
ZNF250-209ENST00000533543 TET1Q8NFU7 2136 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 COL6A3P12111 3177 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 FAM86B1E9PN63 330 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 MEIS1O00470 390 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 TREHO43280 583 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 FAM86B2P0C5J1 330 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 MARK3P27448 753 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 HOXC8P31273 242 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 SCRN1Q12765 414 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 ITGB3BPQ13352 177 aaPredicted RBP10.6□□□□□ -0.71
ZNF250-209ENST00000533543 GPNMBQ14956 572 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 ZNF618Q5T7W0 954 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 TRAF7Q6Q0C0 670 aa10.6□□□□□ -0.71
ZNF250-209ENST00000533543 TRIM22Q8IYM9 498 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms