RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 SPTBN4Q9H254 2564 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 BAZ2BQ9UIF8 2168 aaKnown RBP12.38□□□□□ -0.43
CTNND1-235ENST00000533189 B4E1Z4 1266 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 GCOM1H8Y6P7 765 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-235ENST00000533189 LINC01565O15544 149 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 POLR2MP0CAP2 368 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 GHRP10912 638 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 GTF2F1P35269 517 aaKnown RBP eCLIP12.38□□□□□ -0.435e-6■■■□□ 17.8
CTNND1-235ENST00000533189 PDE1AP54750 535 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 TRAF1Q13077 416 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 ADAM15Q13444 863 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 NEDD9Q14511 834 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 IER5LQ5T953 404 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 FCHSD1Q86WN1 690 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 ENAHQ8N8S7 591 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-235ENST00000533189 CLP1Q92989 425 aaKnown RBP12.38□□□□□ -0.43
CTNND1-235ENST00000533189 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
CTNND1-235ENST00000533189 KMT2EQ8IZD2 1858 aa12.38□□□□□ -0.43
CTNND1-235ENST00000533189 KIAA1671Q9BY89 1806 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 KLRF2D3W0D1 207 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 ZBTB5O15062 677 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 EYA4O95677 639 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 LINC00271P0C7V0 271 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 ZXDAP98168 799 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 IFIT1BQ5T764 474 aaKnown RBP12.37□□□□□ -0.43
CTNND1-235ENST00000533189 UTP14CQ5TAP6 766 aaKnown RBP12.37□□□□□ -0.43
CTNND1-235ENST00000533189 METTL7BQ6UX53 244 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 CYFIP1Q7L576 1253 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 RSPH3Q86UC2 560 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 STAG2Q8N3U4 1231 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 FBXL6Q8N531 539 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 RILPL2Q969X0 211 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 UBAC1Q9BSL1 405 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 NRCAMQ92823 1304 aa12.37□□□□□ -0.43
CTNND1-235ENST00000533189 ENPP3O14638 875 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 PPP1R11O60927 126 aaPredicted RBP12.36□□□□□ -0.43
CTNND1-235ENST00000533189 STAM2O75886 525 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 CHRNA1P02708 482 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 NAALADL2Q58DX5 795 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 TAF2Q6P1X5 1199 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 TRIM50Q86XT4 487 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 HOMER1Q86YM7 354 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 EFHBQ8N7U6 833 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 LMBR1Q8WVP7 490 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 P2RX5Q93086 422 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 ZNF689Q96CS4 500 aaPredicted RBP12.36□□□□□ -0.43
CTNND1-235ENST00000533189 MTMR8Q96EF0 704 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 MSLNLQ96KJ4 702 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 GPR20Q99678 358 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 BCAS3Q9H6U6 928 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 RC3H2Q9HBD1 1191 aaKnown RBP12.36□□□□□ -0.43
CTNND1-235ENST00000533189 ZSWIM5Q9P217 1185 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 PLAGL2Q9UPG8 496 aa12.36□□□□□ -0.43
CTNND1-235ENST00000533189 SPATA31C2B4DYI2 1134 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 LOC730098B7Z3J9 87 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 FIBPO43427 364 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 GFRA3O60609 400 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 ICAM3P32942 547 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 RRP1P56182 461 aaKnown RBP12.35□□□□□ -0.43
CTNND1-235ENST00000533189 ADAM17P78536 824 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 SP4Q02446 784 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 TCF15Q12870 199 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 LPIN1Q14693 890 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 SMRP1Q8NCR6 262 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 INPP4AQ96PE3 977 aaPredicted RBP12.35□□□□□ -0.43
CTNND1-235ENST00000533189 KRT23Q9C075 422 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 IRF2BPLQ9H1B7 796 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 CNNM2Q9H8M5 875 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 EHMT1Q9H9B1 1298 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 SUPT16HQ9Y5B9 1047 aaKnown RBP12.35□□□□□ -0.43
CTNND1-235ENST00000533189 PTPRZ1P23471 2315 aaPredicted RBP12.35□□□□□ -0.43
CTNND1-235ENST00000533189 LOXHD1Q8IVV2 1947 aa12.35□□□□□ -0.43
CTNND1-235ENST00000533189 DGKIO75912 1065 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 ITGB1P05556 798 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 NRIP1P48552 1158 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 SIGLEC14Q08ET2 396 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 COASYQ13057 564 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 CAMK1Q14012 370 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 CBX2Q14781 532 aaPredicted RBP12.34□□□□□ -0.43
CTNND1-235ENST00000533189 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
CTNND1-235ENST00000533189 RUFY4Q6ZNE9 571 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 ADGRD2Q7Z7M1 963 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 CMTR2Q8IYT2 770 aaKnown RBP12.34□□□□□ -0.43
CTNND1-235ENST00000533189 SPPL3Q8TCT6 385 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 FAM86C1Q9NVL1 165 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 RTEL1Q9NZ71 1219 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 CLEC1BQ9P126 229 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 MAD2L2Q9UI95 211 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 USP15Q9Y4E8 981 aaPredicted RBP12.34□□□□□ -0.43
CTNND1-235ENST00000533189 MRPL42Q9Y6G3 142 aaKnown RBP12.34□□□□□ -0.43
CTNND1-235ENST00000533189 PLXNA4Q9HCM2 1894 aa12.34□□□□□ -0.43
CTNND1-235ENST00000533189 SDSP20132 328 aa12.33□□□□□ -0.44
CTNND1-235ENST00000533189 DNAJB1P25685 340 aa12.33□□□□□ -0.44
CTNND1-235ENST00000533189 MRPS9P82933 396 aaKnown RBP12.33□□□□□ -0.44
CTNND1-235ENST00000533189 MGAT3Q09327 533 aa12.33□□□□□ -0.44
CTNND1-235ENST00000533189 PPFIA1Q13136 1202 aa12.33□□□□□ -0.44
CTNND1-235ENST00000533189 SEMA3FQ13275 785 aa12.33□□□□□ -0.44
CTNND1-235ENST00000533189 PAN2Q504Q3 1202 aaKnown RBP12.33□□□□□ -0.44
CTNND1-235ENST00000533189 FBXO47Q5MNV8 452 aa12.33□□□□□ -0.44
CTNND1-235ENST00000533189 TSHZ1Q6ZSZ6 1077 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms