RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CRYGNQ8WXF5 182 aa34.54■■■■□ 3.12
SSSCA1-207ENST00000533115 ATP6V0A1Q93050 837 aa34.54■■■■□ 3.12
SSSCA1-207ENST00000533115 WNT8BQ93098 351 aa34.54■■■■□ 3.12
SSSCA1-207ENST00000533115 FTOQ9C0B1 505 aaKnown RBP eCLIP34.54■■■■□ 3.12
SSSCA1-207ENST00000533115 JPH1Q9HDC5 661 aaPredicted RBP34.54■■■■□ 3.12
SSSCA1-207ENST00000533115 SH3GLB2Q9NR46 395 aa34.54■■■■□ 3.12
SSSCA1-207ENST00000533115 ZBBXA8MT70 800 aa34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 PARNO95453 639 aaKnown RBP34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 CYP3A4P08684 503 aa34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 CPLX2Q6PUV4 134 aaKnown RBP34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 NIPA1Q7RTP0 329 aa34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 SDF4Q9BRK5 362 aa34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 PBX4Q9BYU1 374 aa34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 AGO4Q9HCK5 861 aaKnown RBP34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 SLC9A2Q9UBY0 812 aa34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 STXBP5LQ9Y2K9 1186 aa34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 SLC4A7Q9Y6M7 1214 aa34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 NFASCO94856 1347 aa34.53■■■■□ 3.12
SSSCA1-207ENST00000533115 IL17RAQ96F46 866 aa34.52■■■■□ 3.12
SSSCA1-207ENST00000533115 SETD4Q9NVD3 440 aa34.52■■■■□ 3.12
SSSCA1-207ENST00000533115 DEXIO95424 95 aa34.51■■■■□ 3.12
SSSCA1-207ENST00000533115 GNAT1P11488 350 aa34.51■■■■□ 3.12
SSSCA1-207ENST00000533115 PBX2P40425 430 aa34.51■■■■□ 3.12
SSSCA1-207ENST00000533115 GPNMBQ14956 572 aa34.51■■■■□ 3.12
SSSCA1-207ENST00000533115 TIFAQ96CG3 184 aa34.51■■■■□ 3.12
SSSCA1-207ENST00000533115 FAM86B1E9PN63 330 aa34.5■■■■□ 3.11
SSSCA1-207ENST00000533115 TREHO43280 583 aa34.5■■■■□ 3.11
SSSCA1-207ENST00000533115 FAM86B2P0C5J1 330 aa34.5■■■■□ 3.11
SSSCA1-207ENST00000533115 ITGB3BPQ13352 177 aaPredicted RBP34.5■■■■□ 3.11
SSSCA1-207ENST00000533115 ZNF618Q5T7W0 954 aa34.5■■■■□ 3.11
SSSCA1-207ENST00000533115 RASGRP4Q8TDF6 673 aa34.5■■■■□ 3.11
SSSCA1-207ENST00000533115 SCRN1Q12765 414 aa34.49■■■■□ 3.11
SSSCA1-207ENST00000533115 TRAF7Q6Q0C0 670 aa34.49■■■■□ 3.11
SSSCA1-207ENST00000533115 PLA2G4DQ86XP0 818 aa34.49■■■■□ 3.11
SSSCA1-207ENST00000533115 GLG1Q92896 1179 aa34.49■■■■□ 3.11
SSSCA1-207ENST00000533115 SLKQ9H2G2 1235 aaPredicted RBP34.49■■■■□ 3.11
SSSCA1-207ENST00000533115 SMARCAD1Q9H4L7 1026 aa34.49■■■■□ 3.11
SSSCA1-207ENST00000533115 ERAP1Q9NZ08 941 aa34.49■■■■□ 3.11
SSSCA1-207ENST00000533115 TPCN1Q9ULQ1 816 aa34.49■■■■□ 3.11
SSSCA1-207ENST00000533115 TET1Q8NFU7 2136 aa34.49■■■■□ 3.11
SSSCA1-207ENST00000533115 COL6A3P12111 3177 aa34.48■■■■□ 3.11
SSSCA1-207ENST00000533115 SEC24BO95487 1268 aa34.48■■■■□ 3.11
SSSCA1-207ENST00000533115 THPOP40225 353 aa34.48■■■■□ 3.11
SSSCA1-207ENST00000533115 NLRP5P59047 1200 aa34.48■■■■□ 3.11
SSSCA1-207ENST00000533115 ANKRD1Q15327 319 aa34.48■■■■□ 3.11
SSSCA1-207ENST00000533115 RAB30Q15771 203 aa34.48■■■■□ 3.11
SSSCA1-207ENST00000533115 MSRAQ9UJ68 235 aa34.48■■■■□ 3.11
SSSCA1-207ENST00000533115 EMSYQ7Z589 1322 aa34.48■■■■□ 3.11
SSSCA1-207ENST00000533115 NRCAMQ92823 1304 aa34.48■■■■□ 3.11
SSSCA1-207ENST00000533115 IGLV3-22A0A075B6J6 115 aa34.47■■■■□ 3.11
SSSCA1-207ENST00000533115 NBNO60934 754 aa34.47■■■■□ 3.11
SSSCA1-207ENST00000533115 LGR5O75473 907 aa34.47■■■■□ 3.11
SSSCA1-207ENST00000533115 CXCL10P02778 98 aa34.47■■■■□ 3.11
SSSCA1-207ENST00000533115 AK2P54819 239 aa34.47■■■■□ 3.11
SSSCA1-207ENST00000533115 ACTR2P61160 394 aa34.47■■■■□ 3.11
SSSCA1-207ENST00000533115 LMBR1Q8WVP7 490 aa34.47■■■■□ 3.11
SSSCA1-207ENST00000533115 CDX2Q99626 313 aaPredicted RBP34.47■■■■□ 3.11
SSSCA1-207ENST00000533115 PFKFB2O60825 505 aa34.46■■■■□ 3.11
SSSCA1-207ENST00000533115 ATP2A2P16615 1042 aaKnown RBP34.46■■■■□ 3.11
SSSCA1-207ENST00000533115 MARK3P27448 753 aa34.46■■■■□ 3.11
SSSCA1-207ENST00000533115 ADAM17P78536 824 aa34.46■■■■□ 3.11
SSSCA1-207ENST00000533115 PCYT2Q99447 389 aa34.46■■■■□ 3.11
SSSCA1-207ENST00000533115 ZNF576Q9H609 170 aa34.46■■■■□ 3.11
SSSCA1-207ENST00000533115 CDKL5O76039 1030 aa34.45■■■■□ 3.11
SSSCA1-207ENST00000533115 BAIAP3O94812 1187 aa34.45■■■■□ 3.11
SSSCA1-207ENST00000533115 AZI2Q9H6S1 392 aa34.45■■■■□ 3.11
SSSCA1-207ENST00000533115 CDH23Q9H251 3354 aa34.44■■■■□ 3.1
SSSCA1-207ENST00000533115 RSPH10B2B2RC85 870 aa34.44■■■■□ 3.1
SSSCA1-207ENST00000533115 RSPH10BP0C881 870 aa34.44■■■■□ 3.1
SSSCA1-207ENST00000533115 SETQ01105 290 aaPredicted RBP34.44■■■■□ 3.1
SSSCA1-207ENST00000533115 PPFIA1Q13136 1202 aa34.44■■■■□ 3.1
SSSCA1-207ENST00000533115 MBTPS1Q14703 1052 aa34.44■■■■□ 3.1
SSSCA1-207ENST00000533115 CNKSR3Q6P9H4 555 aa34.44■■■■□ 3.1
SSSCA1-207ENST00000533115 PCDHA4Q9UN74 947 aa34.44■■■■□ 3.1
SSSCA1-207ENST00000533115 CAND2O75155 1236 aa34.43■■■■□ 3.1
SSSCA1-207ENST00000533115 ATG7O95352 703 aa34.43■■■■□ 3.1
SSSCA1-207ENST00000533115 CIITAP33076 1130 aa34.43■■■■□ 3.1
SSSCA1-207ENST00000533115 FAM177A1Q8N128 213 aaPredicted RBP34.43■■■■□ 3.1
SSSCA1-207ENST00000533115 AIFM3Q96NN9 605 aa34.43■■■■□ 3.1
SSSCA1-207ENST00000533115 SLC9A7Q96T83 725 aa34.43■■■■□ 3.1
SSSCA1-207ENST00000533115 KAT6AQ92794 2004 aa34.43■■■■□ 3.1
SSSCA1-207ENST00000533115 GBF1Q92538 1859 aa34.42■■■■□ 3.1
SSSCA1-207ENST00000533115 IPO5O00410 1097 aaKnown RBP34.42■■■■□ 3.1
SSSCA1-207ENST00000533115 DHX15O43143 795 aaKnown RBP34.42■■■■□ 3.1
SSSCA1-207ENST00000533115 RABGGTBP53611 331 aa34.42■■■■□ 3.1
SSSCA1-207ENST00000533115 PHOSPHO2Q8TCD6 241 aa34.42■■■■□ 3.1
SSSCA1-207ENST00000533115 ZNF577Q9BSK1 485 aa34.42■■■■□ 3.1
SSSCA1-207ENST00000533115 YBX2Q9Y2T7 364 aaKnown RBP34.42■■■■□ 3.1
SSSCA1-207ENST00000533115 DDX39AO00148 427 aaKnown RBP34.41■■■■□ 3.1
SSSCA1-207ENST00000533115 CCNE2O96020 404 aa34.41■■■■□ 3.1
SSSCA1-207ENST00000533115 GRIN2CQ14957 1233 aa34.41■■■■□ 3.1
SSSCA1-207ENST00000533115 GRIK4Q16099 956 aa34.41■■■■□ 3.1
SSSCA1-207ENST00000533115 PLPPR4Q7Z2D5 763 aa34.41■■■■□ 3.1
SSSCA1-207ENST00000533115 NKX2-4Q9H2Z4 354 aa34.41■■■■□ 3.1
SSSCA1-207ENST00000533115 PCDHA11Q9Y5I1 949 aa34.41■■■■□ 3.1
SSSCA1-207ENST00000533115 STK36Q9NRP7 1315 aa34.4■■■■□ 3.1
SSSCA1-207ENST00000533115 STAT5BP51692 787 aa34.4■■■■□ 3.1
SSSCA1-207ENST00000533115 PRR16Q569H4 304 aa34.4■■■■□ 3.1
SSSCA1-207ENST00000533115 GALNT17Q6IS24 598 aa34.4■■■■□ 3.1
SSSCA1-207ENST00000533115 BLIDQ8IZY5 108 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms