RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CCDC155Q8N6L0 562 aa17.49■□□□□ 0.39
CPSF1-210ENST00000532935 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
CPSF1-210ENST00000532935 DAGLBQ8NCG7 672 aa17.49■□□□□ 0.39
CPSF1-210ENST00000532935 CAGE1Q8TC20 777 aa17.49■□□□□ 0.39
CPSF1-210ENST00000532935 DHX38Q92620 1227 aaKnown RBP17.49■□□□□ 0.39
CPSF1-210ENST00000532935 KIF2CQ99661 725 aa17.49■□□□□ 0.39
CPSF1-210ENST00000532935 GBF1Q92538 1859 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 C17orf102A2RUQ5 167 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 M0R2N6 131 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 SMIM10L2AP0DMW4 78 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 SMIM10L2BP0DMW5 78 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 HOXC8P31273 242 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 RBM25P49756 843 aaKnown RBP17.48■□□□□ 0.39
CPSF1-210ENST00000532935 PTK7Q13308 1070 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 NPY5RQ15761 445 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 GPR153Q6NV75 609 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 ZNF365Q70YC5 407 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 RPUSD2Q8IZ73 545 aaKnown RBP17.48■□□□□ 0.39
CPSF1-210ENST00000532935 ORC3Q9UBD5 711 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-210ENST00000532935 KCNJ14Q9UNX9 436 aa17.48■□□□□ 0.39
CPSF1-210ENST00000532935 IQCF3P0C7M6 154 aa17.47■□□□□ 0.39
CPSF1-210ENST00000532935 XBP1P17861 261 aa17.47■□□□□ 0.39
CPSF1-210ENST00000532935 CIITAP33076 1130 aa17.47■□□□□ 0.39
CPSF1-210ENST00000532935 ACTR2P61160 394 aa17.47■□□□□ 0.39
CPSF1-210ENST00000532935 SETQ01105 290 aaPredicted RBP17.47■□□□□ 0.39
CPSF1-210ENST00000532935 AFAP1L1Q8TED9 768 aa17.47■□□□□ 0.39
CPSF1-210ENST00000532935 WASF1Q92558 559 aa17.47■□□□□ 0.39
CPSF1-210ENST00000532935 VWCEQ96DN2 955 aa17.47■□□□□ 0.39
CPSF1-210ENST00000532935 PHF20Q9BVI0 1012 aa17.47■□□□□ 0.39
CPSF1-210ENST00000532935 RNPEPQ9H4A4 650 aa17.47■□□□□ 0.39
CPSF1-210ENST00000532935 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
CPSF1-210ENST00000532935 IPO5O00410 1097 aaKnown RBP17.46■□□□□ 0.39
CPSF1-210ENST00000532935 EDIL3O43854 480 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 LGR5O75473 907 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 FGBP02675 491 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 FDPSP14324 419 aaKnown RBP17.46■□□□□ 0.39
CPSF1-210ENST00000532935 RFC2P35250 354 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 USP11P51784 963 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 RBL2Q08999 1139 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 PRR16Q569H4 304 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 NSUN7Q8NE18 718 aaKnown RBP17.46■□□□□ 0.39
CPSF1-210ENST00000532935 TBCKQ8TEA7 893 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 GLG1Q92896 1179 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 ATP6V0A1Q93050 837 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 LENG9Q96B70 501 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 ZNF577Q9BSK1 485 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 SMARCAD1Q9H4L7 1026 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 ERAP1Q9NZ08 941 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 LIMCH1Q9UPQ0 1083 aa17.46■□□□□ 0.39
CPSF1-210ENST00000532935 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
CPSF1-210ENST00000532935 DHX15O43143 795 aaKnown RBP17.45■□□□□ 0.38
CPSF1-210ENST00000532935 TREHO43280 583 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 PFKMP08237 780 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 GNAT1P11488 350 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 CKBP12277 381 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 SELPP16109 830 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 MARK3P27448 753 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 ST3GAL1Q11201 340 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 TRIM71Q2Q1W2 868 aaKnown RBP17.45■□□□□ 0.38
CPSF1-210ENST00000532935 RASIP1Q5U651 963 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 LRRC8DQ7L1W4 858 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 DEFB128Q7Z7B8 93 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 SERINC5Q86VE9 423 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 HERVK_113Q902F9 699 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 WNT8BQ93098 351 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 UIMC1Q96RL1 719 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 PCYT2Q99447 389 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 GJB4Q9NTQ9 266 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 SETD4Q9NVD3 440 aa17.45■□□□□ 0.38
CPSF1-210ENST00000532935 JAK2O60674 1132 aa17.44■□□□□ 0.38
CPSF1-210ENST00000532935 ATG7O95352 703 aa17.44■□□□□ 0.38
CPSF1-210ENST00000532935 CCNE2O96020 404 aa17.44■□□□□ 0.38
CPSF1-210ENST00000532935 SMAD3P84022 425 aaKnown RBP17.44■□□□□ 0.38
CPSF1-210ENST00000532935 OTOP2Q7RTS6 562 aa17.44■□□□□ 0.38
CPSF1-210ENST00000532935 KRT25Q7Z3Z0 450 aa17.44■□□□□ 0.38
CPSF1-210ENST00000532935 LMBR1Q8WVP7 490 aa17.44■□□□□ 0.38
CPSF1-210ENST00000532935 MTIF3Q9H2K0 278 aaKnown RBP17.44■□□□□ 0.38
CPSF1-210ENST00000532935 AZI2Q9H6S1 392 aa17.44■□□□□ 0.38
CPSF1-210ENST00000532935 UPF2Q9HAU5 1272 aaKnown RBP17.44■□□□□ 0.38
CPSF1-210ENST00000532935 TBC1D22BQ9NU19 505 aa17.44■□□□□ 0.38
CPSF1-210ENST00000532935 NRCAMQ92823 1304 aa17.44■□□□□ 0.38
CPSF1-210ENST00000532935 ADAM17P78536 824 aa17.43■□□□□ 0.38
CPSF1-210ENST00000532935 NONOQ15233 471 aaKnown RBP eCLIP17.43■□□□□ 0.38
CPSF1-210ENST00000532935 ZNF618Q5T7W0 954 aa17.43■□□□□ 0.38
CPSF1-210ENST00000532935 CXXC1Q9P0U4 656 aaPredicted RBP17.43■□□□□ 0.38
CPSF1-210ENST00000532935 PTPRSQ13332 1948 aa17.43■□□□□ 0.38
CPSF1-210ENST00000532935 SIP14410 1827 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 CYP3A7-CYP3A51PA0A087WV96 503 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 IGKV6D-21A0A0A0MT36 114 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.42■□□□□ 0.38
CPSF1-210ENST00000532935 CCDC194A0A1B0GVG4 234 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.42■□□□□ 0.38
CPSF1-210ENST00000532935 MSH4O15457 936 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 PARNO95453 639 aaKnown RBP17.42■□□□□ 0.38
CPSF1-210ENST00000532935 CYP3A7P24462 503 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 THPOP40225 353 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 STAT5BP51692 787 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 PPFIA1Q13136 1202 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 RABEP1Q15276 862 aa17.42■□□□□ 0.38
CPSF1-210ENST00000532935 Q4G0T1 1027 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms