RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 ENPP3O14638 875 aa16.74■□□□□ 0.27
CDC27-209ENST00000532893 POLR2MP0CAP2 368 aa16.74■□□□□ 0.27
CDC27-209ENST00000532893 GHRP10912 638 aa16.74■□□□□ 0.27
CDC27-209ENST00000532893 ADAM17P78536 824 aa16.74■□□□□ 0.27
CDC27-209ENST00000532893 UTP14CQ5TAP6 766 aaKnown RBP16.74■□□□□ 0.27
CDC27-209ENST00000532893 TRIM50Q86XT4 487 aa16.74■□□□□ 0.27
CDC27-209ENST00000532893 SAMD3Q8N6K7 520 aa16.74■□□□□ 0.27
CDC27-209ENST00000532893 CLP1Q92989 425 aaKnown RBP16.74■□□□□ 0.27
CDC27-209ENST00000532893 PBXIP1Q96AQ6 731 aa16.74■□□□□ 0.27
CDC27-209ENST00000532893 MTMR8Q96EF0 704 aa16.74■□□□□ 0.27
CDC27-209ENST00000532893 ADGRA3Q8IWK6 1321 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 MYH6P13533 1939 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 TMEM221A6NGB7 291 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 M0R296 226 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 SDSP20132 328 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 NT5C2P49902 561 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 CAMK1Q14012 370 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 BTG3Q14201 252 aaPredicted RBP16.73■□□□□ 0.27
CDC27-209ENST00000532893 NEDD9Q14511 834 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 DIEXFQ68CQ4 756 aaKnown RBP16.73■□□□□ 0.27
CDC27-209ENST00000532893 TRIM67Q6ZTA4 783 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 BMP8AQ7Z5Y6 402 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 LMBR1Q8WVP7 490 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 GPR20Q99678 358 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 PLAGL2Q9UPG8 496 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 TELO2Q9Y4R8 837 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 NLRC5Q86WI3 1866 aa16.73■□□□□ 0.27
CDC27-209ENST00000532893 COL4A6Q14031 1691 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 ZDBF2Q9HCK1 2354 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 NDUFV1P49821 464 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 PTPN5P54829 565 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 MRPS9P82933 396 aaKnown RBP16.72■□□□□ 0.27
CDC27-209ENST00000532893 GNPTABQ3T906 1256 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 IFIT1BQ5T764 474 aaKnown RBP16.72■□□□□ 0.27
CDC27-209ENST00000532893 METTL7BQ6UX53 244 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 RUFY4Q6ZNE9 571 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 HOMER1Q86YM7 354 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 ZNF689Q96CS4 500 aaPredicted RBP16.72■□□□□ 0.27
CDC27-209ENST00000532893 MSLNLQ96KJ4 702 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 UBAC1Q9BSL1 405 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 EHMT1Q9H9B1 1298 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 RC3H2Q9HBD1 1191 aaKnown RBP16.72■□□□□ 0.27
CDC27-209ENST00000532893 MAD2L2Q9UI95 211 aa16.72■□□□□ 0.27
CDC27-209ENST00000532893 ZNF215Q9UL58 517 aaPredicted RBP16.72■□□□□ 0.27
CDC27-209ENST00000532893 SPATA31C2B4DYI2 1134 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 EYA4O95677 639 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 MMP1P03956 469 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 ICAM3P32942 547 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 SP4Q02446 784 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 SEMA3FQ13275 785 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 LPIN1Q14693 890 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 SLC35G1Q2M3R5 365 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 INPP4AQ96PE3 977 aaPredicted RBP16.71■□□□□ 0.27
CDC27-209ENST00000532893 PIGSQ96S52 555 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 PLVAPQ9BX97 442 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 KRT23Q9C075 422 aa16.71■□□□□ 0.27
CDC27-209ENST00000532893 NRCAMQ92823 1304 aa16.7■□□□□ 0.26
CDC27-209ENST00000532893 PALM3A6NDB9 673 aaPredicted RBP16.7■□□□□ 0.26
CDC27-209ENST00000532893 DGKIO75912 1065 aa16.7■□□□□ 0.26
CDC27-209ENST00000532893 DNAJB1P25685 340 aa16.7■□□□□ 0.26
CDC27-209ENST00000532893 RRP1P56182 461 aaKnown RBP16.7■□□□□ 0.26
CDC27-209ENST00000532893 ZXDAP98168 799 aa16.7■□□□□ 0.26
CDC27-209ENST00000532893 CWC27Q6UX04 472 aaKnown RBP16.7■□□□□ 0.26
CDC27-209ENST00000532893 ADGRD2Q7Z7M1 963 aa16.7■□□□□ 0.26
CDC27-209ENST00000532893 CLEC1BQ9P126 229 aa16.7■□□□□ 0.26
CDC27-209ENST00000532893 CFAP54Q96N23 3096 aa16.7■□□□□ 0.26
CDC27-209ENST00000532893 USP34Q70CQ2 3546 aa16.7■□□□□ 0.26
CDC27-209ENST00000532893 RALGAPA2Q2PPJ7 1873 aa16.69■□□□□ 0.26
CDC27-209ENST00000532893 ST18O60284 1047 aa16.69■□□□□ 0.26
CDC27-209ENST00000532893 ITGB1P05556 798 aa16.69■□□□□ 0.26
CDC27-209ENST00000532893 TCF15Q12870 199 aa16.69■□□□□ 0.26
CDC27-209ENST00000532893 TRAF1Q13077 416 aa16.69■□□□□ 0.26
CDC27-209ENST00000532893 SEC23AQ15436 765 aa16.69■□□□□ 0.26
CDC27-209ENST00000532893 IMMTQ16891 758 aaKnown RBP16.69■□□□□ 0.26
CDC27-209ENST00000532893 SUGP1Q8IWZ8 645 aaKnown RBP16.69■□□□□ 0.26
CDC27-209ENST00000532893 SPPL3Q8TCT6 385 aa16.69■□□□□ 0.26
CDC27-209ENST00000532893 PPP2R3CQ969Q6 453 aa16.69■□□□□ 0.26
CDC27-209ENST00000532893 MRPL42Q9Y6G3 142 aaKnown RBP16.69■□□□□ 0.26
CDC27-209ENST00000532893 BAZ2BQ9UIF8 2168 aaKnown RBP16.69■□□□□ 0.26
CDC27-209ENST00000532893 ZFHX2Q9C0A1 2572 aaPredicted RBP16.69■□□□□ 0.26
CDC27-209ENST00000532893 PTPRZ1P23471 2315 aaPredicted RBP16.68■□□□□ 0.26
CDC27-209ENST00000532893 LOC730098B7Z3J9 87 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 FIBPO43427 364 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 STAM2O75886 525 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 NRIP1P48552 1158 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 MGAT3Q09327 533 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 PKN1Q16512 942 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 FBXO47Q5MNV8 452 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 TAF2Q6P1X5 1199 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 RBM23Q86U06 439 aaKnown RBP16.68■□□□□ 0.26
CDC27-209ENST00000532893 RSPH3Q86UC2 560 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 EFHBQ8N7U6 833 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 KLHL23Q8NBE8 558 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 SMRP1Q8NCR6 262 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 DNAJB3Q8WWF6 145 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 P2RX5Q93086 422 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 PRRX2Q99811 253 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
CDC27-209ENST00000532893 RIOX1Q9H6W3 641 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms