RNA–Protein interactions for RNA: ENST00000531951.5

PUF60-217, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 973 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-217ENST00000531951 RDM1Q8NG50 284 aa21.22■□□□□ 0.99
PUF60-217ENST00000531951 SH3TC2Q8TF17 1288 aa21.22■□□□□ 0.99
PUF60-217ENST00000531951 PRDM10Q9NQV6 1147 aa21.22■□□□□ 0.99
PUF60-217ENST00000531951 LMBRD1Q9NUN5 540 aa21.22■□□□□ 0.99
PUF60-217ENST00000531951 Q9Y3F1 56 aa21.22■□□□□ 0.99
PUF60-217ENST00000531951 GOLGA6L4A6NEF3 574 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 PP2D1A8MPX8 630 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 PTGS1P23219 599 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 CMA1P23946 247 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 CNGA1P29973 690 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 ACTR2P61160 394 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 SP4Q02446 784 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 SPECC1Q5M775 1068 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 RESP18Q5W5W9 173 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 MIER3Q7Z3K6 550 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 TLK2Q86UE8 772 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 LENG1Q96BZ8 264 aaPredicted RBP21.21■□□□□ 0.99
PUF60-217ENST00000531951 SPATA33Q96N06 139 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 DISC1Q9NRI5 854 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 TELO2Q9Y4R8 837 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 STK24Q9Y6E0 443 aa21.21■□□□□ 0.99
PUF60-217ENST00000531951 GADD45BO75293 160 aaPredicted RBP21.2■□□□□ 0.98
PUF60-217ENST00000531951 DUSP11O75319 330 aaKnown RBP21.2■□□□□ 0.98
PUF60-217ENST00000531951 CDC25AP30304 524 aa21.2■□□□□ 0.98
PUF60-217ENST00000531951 UBE2HP62256 183 aa21.2■□□□□ 0.98
PUF60-217ENST00000531951 EPHA7Q15375 998 aa21.2■□□□□ 0.98
PUF60-217ENST00000531951 HSDL1Q3SXM5 330 aa21.2■□□□□ 0.98
PUF60-217ENST00000531951 USP49Q70CQ1 688 aa21.2■□□□□ 0.98
PUF60-217ENST00000531951 OR6J1Q8NGC5 347 aa21.2■□□□□ 0.98
PUF60-217ENST00000531951 PPTC7Q8NI37 304 aa21.2■□□□□ 0.98
PUF60-217ENST00000531951 ERMNQ8TAM6 284 aa21.2■□□□□ 0.98
PUF60-217ENST00000531951 SYMPKQ92797 1274 aaKnown RBP21.2■□□□□ 0.98
PUF60-217ENST00000531951 EPSTI1Q96J88 318 aa21.2■□□□□ 0.98
PUF60-217ENST00000531951 MMTAG2Q9BU76 263 aaKnown RBP21.2■□□□□ 0.98
PUF60-217ENST00000531951 CCSER1Q9C0I3 900 aa21.2■□□□□ 0.98
PUF60-217ENST00000531951 HMX1Q9NP08 348 aaPredicted RBP21.2■□□□□ 0.98
PUF60-217ENST00000531951 POTEFA5A3E0 1075 aa21.19■□□□□ 0.98
PUF60-217ENST00000531951 NOP56O00567 594 aaKnown RBP21.19■□□□□ 0.98
PUF60-217ENST00000531951 ATG7O95352 703 aa21.19■□□□□ 0.98
PUF60-217ENST00000531951 UBA7P41226 1012 aa21.19■□□□□ 0.98
PUF60-217ENST00000531951 KRT79Q5XKE5 535 aa21.19■□□□□ 0.98
PUF60-217ENST00000531951 HAUS3Q68CZ6 603 aa21.19■□□□□ 0.98
PUF60-217ENST00000531951 ABHD15Q6UXT9 468 aa21.19■□□□□ 0.98
PUF60-217ENST00000531951 SNX29Q8TEQ0 813 aa21.19■□□□□ 0.98
PUF60-217ENST00000531951 MRPS27Q92552 414 aaKnown RBP21.19■□□□□ 0.98
PUF60-217ENST00000531951 GPR20Q99678 358 aa21.19■□□□□ 0.98
PUF60-217ENST00000531951 EIF2AK1Q9BQI3 630 aaKnown RBP21.19■□□□□ 0.98
PUF60-217ENST00000531951 SAMM50Q9Y512 469 aa21.19■□□□□ 0.98
PUF60-217ENST00000531951 PCDHA10Q9Y5I2 948 aa21.19■□□□□ 0.98
PUF60-217ENST00000531951 GSTTP1A0A1W2PQM5 241 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 DDX11L8A8MPP1 907 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 SLC26A4O43511 780 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 PSAPP07602 524 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 SUPT20HL2P0C7V6 817 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 RARBP10826 455 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 TXLNAP40222 546 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 MIS18BP1Q6P0N0 1132 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 CABP7Q86V35 215 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 NEK9Q8TD19 979 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 AFG1LQ8WV93 481 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 SEPT1Q8WYJ6 367 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 POLR3CQ9BUI4 534 aaPredicted RBP21.18■□□□□ 0.98
PUF60-217ENST00000531951 AP5M1Q9H0R1 490 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 UPF3AQ9H1J1 476 aaKnown RBP21.18■□□□□ 0.98
PUF60-217ENST00000531951 FAM13BQ9NYF5 915 aa21.18■□□□□ 0.98
PUF60-217ENST00000531951 DDX20Q9UHI6 824 aaKnown RBP21.18■□□□□ 0.98
PUF60-217ENST00000531951 FAM237AA0A1B0GTK4 181 aa21.17■□□□□ 0.98
PUF60-217ENST00000531951 DYNC1LI2O43237 492 aaPredicted RBP21.17■□□□□ 0.98
PUF60-217ENST00000531951 MSCO60682 206 aa21.17■□□□□ 0.98
PUF60-217ENST00000531951 RPA1P27694 616 aa21.17■□□□□ 0.98
PUF60-217ENST00000531951 TPRNQ4KMQ1 711 aa21.17■□□□□ 0.98
PUF60-217ENST00000531951 FSIP1Q8NA03 581 aa21.17■□□□□ 0.98
PUF60-217ENST00000531951 HSD17B14Q9BPX1 270 aa21.17■□□□□ 0.98
PUF60-217ENST00000531951 HPSEQ9Y251 543 aa21.17■□□□□ 0.98
PUF60-217ENST00000531951 KDM3AQ9Y4C1 1321 aa21.17■□□□□ 0.98
PUF60-217ENST00000531951 MYH11P35749 1972 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 SCN10AQ9Y5Y9 1956 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 SYNRGQ9UMZ2 1314 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 IGKV6D-21A0A0A0MT36 114 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 A0A1B0GVL5 298 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 A6NJR5 290 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 MMP3P08254 477 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 SPATA31C1P0DKV0 1188 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 HOXD8P13378 290 aaPredicted RBP21.16■□□□□ 0.98
PUF60-217ENST00000531951 PFKFB1P16118 471 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 TCF7P36402 384 aaPredicted RBP21.16■□□□□ 0.98
PUF60-217ENST00000531951 CCT6AP40227 531 aaKnown RBP21.16■□□□□ 0.98
PUF60-217ENST00000531951 GJA9P57773 515 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 NKX3-2P78367 333 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 HYIQ5T013 277 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 DYDC2Q96IM9 177 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.16■□□□□ 0.981e-7■■■■□ 24.9
PUF60-217ENST00000531951 GOLPH3LQ9H4A5 285 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 TUFT1Q9NNX1 390 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 RGL1Q9NZL6 768 aa21.16■□□□□ 0.98
PUF60-217ENST00000531951 EMSYQ7Z589 1322 aa21.15■□□□□ 0.98
PUF60-217ENST00000531951 IGSF9BQ9UPX0 1349 aa21.15■□□□□ 0.98
PUF60-217ENST00000531951 MED24O75448 989 aa21.15■□□□□ 0.98
PUF60-217ENST00000531951 LGR5O75473 907 aa21.15■□□□□ 0.98
PUF60-217ENST00000531951 P4HBP07237 508 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms