RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 RDM1Q8NG50 284 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 PKD2L1Q9P0L9 805 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 DAXXQ9UER7 740 aaPredicted RBP18.12■□□□□ 0.49
BRK1-201ENST00000530758 VAV3Q9UKW4 847 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 TELO2Q9Y4R8 837 aa18.12■□□□□ 0.49
BRK1-201ENST00000530758 MYH9P35579 1960 aaKnown RBP18.11■□□□□ 0.49
BRK1-201ENST00000530758 KBTBD13C9JR72 458 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 GAS7O60861 476 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 LGR5O75473 907 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 PRPHP41219 470 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 ACTR2P61160 394 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 NUCB2P80303 420 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 ATP2C1P98194 919 aaPredicted RBP18.11■□□□□ 0.49
BRK1-201ENST00000530758 PTGDRQ13258 359 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 ATL3Q6DD88 541 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 GJA10Q969M2 543 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 C16orf70Q9BSU1 422 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 CIZ1Q9ULV3 898 aaPredicted RBP18.11■□□□□ 0.49
BRK1-201ENST00000530758 PCDHA12Q9UN75 941 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 ELP1O95163 1332 aa18.11■□□□□ 0.49
BRK1-201ENST00000530758 NOP56O00567 594 aaKnown RBP18.1■□□□□ 0.49
BRK1-201ENST00000530758 BMP15O95972 392 aa18.1■□□□□ 0.49
BRK1-201ENST00000530758 OR52Z1P0C646 297 aa18.1■□□□□ 0.49
BRK1-201ENST00000530758 SFNP31947 248 aa18.1■□□□□ 0.49
BRK1-201ENST00000530758 ARL6IP4Q66PJ3 421 aaKnown RBP18.1■□□□□ 0.49
BRK1-201ENST00000530758 FAM173BQ6P4H8 233 aa18.1■□□□□ 0.49
BRK1-201ENST00000530758 DIS3LQ8TF46 1054 aaKnown RBP18.1■□□□□ 0.49
BRK1-201ENST00000530758 KAT2BQ92831 832 aa18.1■□□□□ 0.49
BRK1-201ENST00000530758 IPO9Q96P70 1041 aaKnown RBP18.1■□□□□ 0.49
BRK1-201ENST00000530758 SEZ6LQ9BYH1 1024 aa18.1■□□□□ 0.49
BRK1-201ENST00000530758 UNC45AQ9H3U1 944 aa18.1■□□□□ 0.49
BRK1-201ENST00000530758 TTC12Q9H892 705 aaPredicted RBP18.1■□□□□ 0.49
BRK1-201ENST00000530758 PCDHA10Q9Y5I2 948 aa18.1■□□□□ 0.49
BRK1-201ENST00000530758 EMSYQ7Z589 1322 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 HAS3O00219 553 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 F2P00734 622 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 TCF7P36402 384 aaPredicted RBP18.09■□□□□ 0.49
BRK1-201ENST00000530758 FXR2P51116 673 aaKnown RBP eCLIP18.09■□□□□ 0.49
BRK1-201ENST00000530758 JAK3P52333 1124 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 PDIA5Q14554 519 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 PTPAQ15257 358 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 C1orf53Q5VUE5 145 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 PLPPR4Q7Z2D5 763 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 AFAP1L1Q8TED9 768 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 PAWRQ96IZ0 340 aaKnown RBP18.09■□□□□ 0.49
BRK1-201ENST00000530758 UIMC1Q96RL1 719 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 PCYT2Q99447 389 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 MTG1Q9BT17 334 aaPredicted RBP18.09■□□□□ 0.49
BRK1-201ENST00000530758 CEP131Q9UPN4 1083 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 TCHHQ07283 1943 aa18.09■□□□□ 0.49
BRK1-201ENST00000530758 A0A1W2PQ45 241 aaPredicted RBP18.08■□□□□ 0.48
BRK1-201ENST00000530758 A0A1W2PQY0 241 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 WDR64B1ANS9 1081 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 DDX39AO00148 427 aaKnown RBP18.08■□□□□ 0.48
BRK1-201ENST00000530758 MARCH6O60337 910 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 SORBS3O60504 671 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 LGALS2P05162 132 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 SUPT20HL2P0C7V6 817 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 TXKP42681 527 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 NASPP49321 788 aaPredicted RBP18.08■□□□□ 0.48
BRK1-201ENST00000530758 SF3A1Q15459 793 aaKnown RBP18.08■□□□□ 0.48
BRK1-201ENST00000530758 MIS18BP1Q6P0N0 1132 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 CXCL17Q6UXB2 119 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 NECAB2Q7Z6G3 386 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 SLC43A3Q8NBI5 491 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 GLT1D1Q96MS3 346 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 ZNF396Q96N95 335 aaPredicted RBP18.08■□□□□ 0.48
BRK1-201ENST00000530758 USP28Q96RU2 1077 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 SMARCAD1Q9H4L7 1026 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 DISC1Q9NRI5 854 aa18.08■□□□□ 0.48
BRK1-201ENST00000530758 MAFBQ9Y5Q3 323 aaPredicted RBP18.08■□□□□ 0.48
BRK1-201ENST00000530758 PSAPP07602 524 aa18.07■□□□□ 0.48
BRK1-201ENST00000530758 MYL3P08590 195 aa18.07■□□□□ 0.48
BRK1-201ENST00000530758 SLC26A2P50443 739 aa18.07■□□□□ 0.48
BRK1-201ENST00000530758 SNX17Q15036 470 aa18.07■□□□□ 0.48
BRK1-201ENST00000530758 IGSF22Q8N9C0 903 aa18.07■□□□□ 0.48
BRK1-201ENST00000530758 C11orf49Q9H6J7 331 aa18.07■□□□□ 0.48
BRK1-201ENST00000530758 TCEAL9Q9UHQ7 104 aa18.07■□□□□ 0.48
BRK1-201ENST00000530758 CLIC4Q9Y696 253 aa18.07■□□□□ 0.48
BRK1-201ENST00000530758 KAT6AQ92794 2004 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 GRIN2DO15399 1336 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 H0YGN5 161 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 H3BRB1 525 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 EML1O00423 815 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 MYCNP04198 464 aaPredicted RBP18.06■□□□□ 0.48
BRK1-201ENST00000530758 CDK7P50613 346 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 SP4Q02446 784 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 SLC39A14Q15043 492 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 EPHA7Q15375 998 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 IL17AQ16552 155 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 KATNAL1Q9BW62 490 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 SENP6Q9GZR1 1112 aaPredicted RBP18.06■□□□□ 0.48
BRK1-201ENST00000530758 TUT1Q9H6E5 874 aaKnown RBP18.06■□□□□ 0.48
BRK1-201ENST00000530758 ATP6V1DQ9Y5K8 247 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 DNAH12Q6ZR08 3092 aa18.06■□□□□ 0.48
BRK1-201ENST00000530758 TECP42680 631 aa18.05■□□□□ 0.48
BRK1-201ENST00000530758 STAT5BP51692 787 aa18.05■□□□□ 0.48
BRK1-201ENST00000530758 PTPN11Q06124 597 aaPredicted RBP18.05■□□□□ 0.48
BRK1-201ENST00000530758 FOXD4L5Q5VV16 416 aaPredicted RBP18.05■□□□□ 0.48
BRK1-201ENST00000530758 SWSAP1Q6NVH7 229 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms