RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 SV2CQ496J9 727 aa8.91□□□□□ -0.98
SVIP-204ENST00000530199 ZBTB38Q8NAP3 1195 aaPredicted RBP8.91□□□□□ -0.98
SVIP-204ENST00000530199 ZSWIM2Q8NEG5 633 aa8.91□□□□□ -0.98
SVIP-204ENST00000530199 DNAJB8Q8NHS0 232 aa8.91□□□□□ -0.98
SVIP-204ENST00000530199 GPATCH3Q96I76 525 aa8.91□□□□□ -0.98
SVIP-204ENST00000530199 FAM46AQ96IP4 442 aaKnown RBP8.91□□□□□ -0.98
SVIP-204ENST00000530199 SEMA6CQ9H3T2 930 aa8.91□□□□□ -0.98
SVIP-204ENST00000530199 DAGLAQ9Y4D2 1042 aa8.91□□□□□ -0.98
SVIP-204ENST00000530199 KRBA1A5PL33 1030 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 C9orf172C9J069 976 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 CBFA2T2O43439 604 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 GJB1P08034 283 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 ZBTB48P10074 688 aaPredicted RBP8.9□□□□□ -0.98
SVIP-204ENST00000530199 CAPN2P17655 700 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 TKFCQ3LXA3 575 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 HEATR6Q6AI08 1181 aaKnown RBP8.9□□□□□ -0.98
SVIP-204ENST00000530199 OTUD7BQ6GQQ9 843 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 SULT6B1Q6IMI4 303 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 LETMD1Q6P1Q0 360 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 CCDC144CPQ8IYA2 1237 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 TDHQ8IZJ6 230 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 ZNF512BQ96KM6 892 aaPredicted RBP8.9□□□□□ -0.98
SVIP-204ENST00000530199 PSMG3-AS1Q96PY0 264 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 FMNL2Q96PY5 1086 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 UBL7Q96S82 380 aaPredicted RBP8.9□□□□□ -0.98
SVIP-204ENST00000530199 FEZ1Q99689 392 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 APBA2Q99767 749 aa8.9□□□□□ -0.98
SVIP-204ENST00000530199 SSC5DA1L4H1 1573 aa8.9□□□□□ -0.99
SVIP-204ENST00000530199 DUOX1Q9NRD9 1551 aa8.9□□□□□ -0.99
SVIP-204ENST00000530199 RTL9Q8NET4 1388 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 TMEM265A0A087WTH1 108 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 AGRPO00253 132 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 BBOX1O75936 387 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 NFICP08651 508 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 NOS3P29474 1203 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 GYS2P54840 703 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 PTPROQ16827 1216 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 ANKRD39Q53RE8 183 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 TMEM67Q5HYA8 995 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 NBPF12Q5TAG4 269 aaPredicted RBP8.89□□□□□ -0.99
SVIP-204ENST00000530199 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.89□□□□□ -0.99
SVIP-204ENST00000530199 ARMC9Q7Z3E5 817 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 SYNPOQ8N3V7 929 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 FBLIM1Q8WUP2 373 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 WFDC12Q8WWY7 111 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 EZH1Q92800 747 aaPredicted RBP8.89□□□□□ -0.99
SVIP-204ENST00000530199 VWCEQ96DN2 955 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 NACC1Q96RE7 527 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 MIPEPQ99797 713 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 KLHL25Q9H0H3 589 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 CWC22Q9HCG8 908 aaKnown RBP8.89□□□□□ -0.99
SVIP-204ENST00000530199 PRKAB1Q9Y478 270 aa8.89□□□□□ -0.99
SVIP-204ENST00000530199 A0A1W2PQU0 124 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 SLITRK5O94991 958 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 VIL1P09327 827 aaKnown RBP8.88□□□□□ -0.99
SVIP-204ENST00000530199 COL8A1P27658 744 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 NF2P35240 595 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 IREB2P48200 963 aaKnown RBP8.88□□□□□ -0.99
SVIP-204ENST00000530199 PRMT2P55345 433 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 TCEA2Q15560 299 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 HLFQ16534 295 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 SGO2Q562F6 1265 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 ZC3H12BQ5HYM0 836 aaKnown RBP8.88□□□□□ -0.99
SVIP-204ENST00000530199 DCAF15Q66K64 600 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 FILIP1Q7Z7B0 1213 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 RIN3Q8TB24 985 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 KREMEN1Q96MU8 473 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 YIPF2Q9BWQ6 316 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 MKRN2Q9H000 416 aaKnown RBP8.88□□□□□ -0.99
SVIP-204ENST00000530199 IFT57Q9NWB7 429 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 ADAMTS8Q9UP79 889 aa8.88□□□□□ -0.99
SVIP-204ENST00000530199 ABCC4O15439 1325 aa8.87□□□□□ -0.99
SVIP-204ENST00000530199 CDH23Q9H251 3354 aa8.87□□□□□ -0.99
SVIP-204ENST00000530199 DYNC1LI2O43237 492 aaPredicted RBP8.87□□□□□ -0.99
SVIP-204ENST00000530199 FARP2O94887 1054 aaPredicted RBP8.87□□□□□ -0.99
SVIP-204ENST00000530199 ASMTLO95671 621 aa8.87□□□□□ -0.99
SVIP-204ENST00000530199 UVSSAQ2YD98 709 aa8.87□□□□□ -0.99
SVIP-204ENST00000530199 CDH24Q86UP0 819 aa8.87□□□□□ -0.99
SVIP-204ENST00000530199 ZNF513Q8N8E2 541 aaPredicted RBP8.87□□□□□ -0.99
SVIP-204ENST00000530199 FGD4Q96M96 766 aa8.87□□□□□ -0.99
SVIP-204ENST00000530199 TMX1Q9H3N1 280 aa8.87□□□□□ -0.99
SVIP-204ENST00000530199 SPC25Q9HBM1 224 aa8.87□□□□□ -0.99
SVIP-204ENST00000530199 APEX2Q9UBZ4 518 aa8.87□□□□□ -0.99
SVIP-204ENST00000530199 USP16Q9Y5T5 823 aa8.87□□□□□ -0.99
SVIP-204ENST00000530199 IRS2Q9Y4H2 1338 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 DDX60Q8IY21 1712 aaKnown RBP8.86□□□□□ -0.99
SVIP-204ENST00000530199 COL2A1P02458 1487 aaPredicted RBP8.86□□□□□ -0.99
SVIP-204ENST00000530199 PPP1R12AO14974 1030 aaPredicted RBP8.86□□□□□ -0.99
SVIP-204ENST00000530199 DNAJC6O75061 913 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 PIP4K2AP48426 406 aaPredicted RBP8.86□□□□□ -0.99
SVIP-204ENST00000530199 RNF4P78317 190 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 MAP7Q14244 749 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 TAF7LQ5H9L4 462 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 PRAMEF18Q5VWM3 479 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 SEZ6L2Q6UXD5 910 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 C7orf61Q8IZ16 206 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 AGBL3Q8NEM8 1001 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 MAFAQ8NHW3 353 aaPredicted RBP8.86□□□□□ -0.99
SVIP-204ENST00000530199 WNK4Q96J92 1243 aa8.86□□□□□ -0.99
SVIP-204ENST00000530199 BRINP2Q9C0B6 783 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms