RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 NOD1Q9Y239 953 aa17.64■□□□□ 0.41
CCDC90B-215ENST00000529745 IGLV3-22A0A075B6J6 115 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 TMEM265A0A087WTH1 108 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 CPLX1O14810 134 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 SORBS3O60504 671 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 PFKFB2O60825 505 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 SEC24BO95487 1268 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 IQCF3P0C7M6 154 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 TRIM71Q2Q1W2 868 aaKnown RBP17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 MYLIPQ8WY64 445 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 SEPT1Q8WYJ6 367 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 ZNF215Q9UL58 517 aaPredicted RBP17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 NCOR1O75376 2440 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 EMSYQ7Z589 1322 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 STK36Q9NRP7 1315 aa17.63■□□□□ 0.41
CCDC90B-215ENST00000529745 PTPRSQ13332 1948 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 GSTTP1A0A1W2PQM5 241 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 ADAMTS3O15072 1205 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 FGBP02675 491 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 CIITAP33076 1130 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 TCF7P36402 384 aaPredicted RBP17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 AK2P54819 239 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 ADAM17P78536 824 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 SCRN1Q12765 414 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 HIC1Q14526 733 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 TJAP1Q5JTD0 557 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 JAKMIP3Q5VZ66 844 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 SERINC5Q86VE9 423 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 RETREG2Q8NC44 543 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 DAGLBQ8NCG7 672 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 CYP2W1Q8TAV3 490 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 SCLYQ96I15 445 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 MTIF3Q9H2K0 278 aaKnown RBP17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 AGO4Q9HCK5 861 aaKnown RBP17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 VPS54Q9P1Q0 977 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 TPCN1Q9ULQ1 816 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 TELO2Q9Y4R8 837 aa17.62■□□□□ 0.41
CCDC90B-215ENST00000529745 MYH9P35579 1960 aaKnown RBP17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 LGR5O75473 907 aa17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 CDKL5O76039 1030 aa17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 ATG7O95352 703 aa17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 ARP10275 920 aa17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 ACRP10323 421 aa17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 C8orf34Q49A92 452 aa17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 GALNT17Q6IS24 598 aa17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 LARP6Q9BRS8 491 aaKnown RBP17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 SLKQ9H2G2 1235 aaPredicted RBP17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 RNPEPQ9H4A4 650 aa17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 JPH1Q9HDC5 661 aaPredicted RBP17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 SLC9A2Q9UBY0 812 aa17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 SIP14410 1827 aa17.61■□□□□ 0.41
CCDC90B-215ENST00000529745 C17orf102A2RUQ5 167 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 FAM86B1E9PN63 330 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 M0R2N6 131 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 FAM86B2P0C5J1 330 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 SMIM10L2AP0DMW4 78 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 SMIM10L2BP0DMW5 78 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 CKBP12277 381 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 SELPP16109 830 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 CHMP4BP1P59074 171 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 SETQ01105 290 aaPredicted RBP17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 STK3Q13188 491 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 ITGB3BPQ13352 177 aaPredicted RBP17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 TRAF7Q6Q0C0 670 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 C22orf23Q9BZE7 217 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 PCDHA4Q9UN74 947 aa17.6■□□□□ 0.41
CCDC90B-215ENST00000529745 NRCAMQ92823 1304 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 CAND2O75155 1236 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 CXCL10P02778 98 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 GNAT1P11488 350 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 USP11P51784 963 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 GPNMBQ14956 572 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 NPY5RQ15761 445 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 LRRC8DQ7L1W4 858 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 TRIM50Q86XT4 487 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 SDF4Q9BRK5 362 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 SMARCAD1Q9H4L7 1026 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 ERAP1Q9NZ08 941 aa17.59■□□□□ 0.41
CCDC90B-215ENST00000529745 IGKV6D-21A0A0A0MT36 114 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 DHX15O43143 795 aaKnown RBP17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 EDIL3O43854 480 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 PPFIA3O75145 1194 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 FOSL2P15408 326 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 ZNF76P36508 570 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 NLRP5P59047 1200 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 ZNF200P98182 395 aaPredicted RBP17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 UTP14CQ5TAP6 766 aaKnown RBP17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 RPAINQ86UA6 219 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 PLA2G4DQ86XP0 818 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 ATP6V0A1Q93050 837 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 WNT8BQ93098 351 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 PCYT2Q99447 389 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 TTYH1Q9H313 450 aaPredicted RBP17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 CXXC1Q9P0U4 656 aaPredicted RBP17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 MICAL3Q7RTP6 2002 aa17.58■□□□□ 0.4
CCDC90B-215ENST00000529745 BDP1A6H8Y1 2624 aa17.57■□□□□ 0.4
CCDC90B-215ENST00000529745 BAIAP3O94812 1187 aa17.57■□□□□ 0.4
CCDC90B-215ENST00000529745 CTDNEP1O95476 244 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms