RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 CTDNEP1O95476 244 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 ABL1P00519 1130 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 NR3C2P08235 984 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 AKR1A1P14550 325 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 SCNN1AP37088 669 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 NAPAP54920 295 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 STXBP2Q15833 593 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 PTPROQ16827 1216 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 ARHGEF16Q5VV41 709 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 IQSEC1Q6DN90 963 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 PPP1R18Q6NYC8 613 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 EEPD1Q7L9B9 569 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 VSIG10LQ86VR7 867 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 FCHSD1Q86WN1 690 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 TRIM22Q8IYM9 498 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 TTC13Q8NBP0 860 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 C1orf216Q8TAB5 229 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 SMARCC2Q8TAQ2 1214 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 EPS8L1Q8TE68 723 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 CUL5Q93034 780 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 GTF3C6Q969F1 213 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 SHISA4Q96DD7 197 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 PDCD2LQ9BRP1 358 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 ZMYND12Q9H0C1 365 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 GLT8D2Q9H1C3 349 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 VTA1Q9NP79 307 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 RIC8AQ9NPQ8 531 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 SH3GLB2Q9NR46 395 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 PDGFCQ9NRA1 345 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 KLHL42Q9P2K6 505 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 DCTN4Q9UJW0 460 aa7.16□□□□□ -1.26
ATPAF1-209ENST00000529214 ESYT2A0FGR8 921 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 GOLGA6CA6NDK9 693 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 GOLGA6BA6NDN3 693 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 DDX11L8A8MPP1 907 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 DUSP11O75319 330 aaKnown RBP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 EIF3JO75822 258 aaKnown RBP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 GOLGA6DP0CG33 693 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 FDPSP14324 419 aaKnown RBP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 EIF2AK2P19525 551 aaKnown RBP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 GTF2F1P35269 517 aaKnown RBP eCLIP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 ADCYAP1R1P41586 468 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 TNFAIP2Q03169 654 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 PTK7Q13308 1070 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 PGM5Q15124 567 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 LONRF3Q496Y0 759 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 DNTTIP2Q5QJE6 756 aaKnown RBP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 ANO1Q5XXA6 986 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 GLYCTKQ8IVS8 523 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 ANKLE1Q8NAG6 615 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 CCDC12Q8WUD4 166 aaPredicted RBP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 TSC1Q92574 1164 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 KHSRPQ92945 711 aaKnown RBP eCLIP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 SH2B1Q9NRF2 756 aaPredicted RBP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 GEMIN8Q9NWZ8 242 aaKnown RBP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 GOLGA6AQ9NYA3 693 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 ZHX1Q9UKY1 873 aaPredicted RBP7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 PCDHA6Q9UN73 950 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 PCDHGA10Q9Y5H3 936 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 PCDHA8Q9Y5H6 950 aa7.15□□□□□ -1.27
ATPAF1-209ENST00000529214 PLXNA1Q9UIW2 1896 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 HMGB1P1B2RPK0 211 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 ADCY6O43306 1168 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 DTNBO60941 627 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 FOSP01100 380 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 RARBP10826 455 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 MYCLP12524 364 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 SKIP12755 728 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 SMPD1P17405 629 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 GNA11P29992 359 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 MCM2P49736 904 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 ADCY7P51828 1080 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 NKX3-2P78367 333 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 ST3GAL1Q11201 340 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 ZNF211Q13398 564 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 UBE2SQ16763 222 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 SWI5Q1ZZU3 235 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 TMEM63BQ5T3F8 832 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 XRRA1Q6P2D8 792 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 CCDC62Q6P9F0 684 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 UBE2Q1Q7Z7E8 422 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 NT5DC4Q86YG4 428 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 FBXO16Q8IX29 292 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 ZNF513Q8N8E2 541 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 SLC43A3Q8NBI5 491 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 ARRDC4Q8NCT1 418 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 NSUN7Q8NE18 718 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 SPACA7Q96KW9 195 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 LLPHQ9BRT6 129 aaKnown RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 WDR11Q9BZH6 1224 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 C6orf50Q9HD87 102 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 VPS54Q9P1Q0 977 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 ORC3Q9UBD5 711 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 FEZ2Q9UHY8 353 aaPredicted RBP7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 Q9Y3F1 56 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 NUB1Q9Y5A7 615 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 FRMPD4Q14CM0 1322 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 STK36Q9NRP7 1315 aa7.14□□□□□ -1.27
ATPAF1-209ENST00000529214 MYH6P13533 1939 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 620.4 ms