RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 DNAJB2P25686 324 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 ANAPC15P60006 121 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 SEMA3FQ13275 785 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 UBE2SQ16763 222 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 CEP55Q53EZ4 464 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 LRRC8DQ7L1W4 858 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 DEFB128Q7Z7B8 93 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 CCDC148Q8NFR7 591 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 ATP6V0A1Q93050 837 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 ZMYND12Q9H0C1 365 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 ZNF576Q9H609 170 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 SH3GLB2Q9NR46 395 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 ERAP1Q9NZ08 941 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 HCN4Q9Y3Q4 1203 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 PCDHA11Q9Y5I1 949 aa10.96□□□□□ -0.65
CHD7-208ENST00000528280 MUC6Q6W4X9 2439 aa10.96□□□□□ -0.66
CHD7-208ENST00000528280 NFASCO94856 1347 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 ABHD14A-ACY1A0A1B0GW23 586 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 MEIS1O00470 390 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 SORBS3O60504 671 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 CYP3A4P08684 503 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 SMIM10L2AP0DMW4 78 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 SMIM10L2BP0DMW5 78 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 KCNA2P16389 499 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 ATP2A2P16615 1042 aaKnown RBP10.95□□□□□ -0.66
CHD7-208ENST00000528280 TCF7P36402 384 aaPredicted RBP10.95□□□□□ -0.66
CHD7-208ENST00000528280 SREBF1P36956 1147 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 CLK2P49760 499 aaKnown RBP10.95□□□□□ -0.66
CHD7-208ENST00000528280 MRPS5P82675 430 aaKnown RBP10.95□□□□□ -0.66
CHD7-208ENST00000528280 SSRP1Q08945 709 aaKnown RBP10.95□□□□□ -0.66
CHD7-208ENST00000528280 IKBKEQ14164 716 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 ANKRD1Q15327 319 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 UTP14CQ5TAP6 766 aaKnown RBP10.95□□□□□ -0.66
CHD7-208ENST00000528280 FAM43BQ6ZT52 329 aaPredicted RBP10.95□□□□□ -0.66
CHD7-208ENST00000528280 SERINC5Q86VE9 423 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 GLG1Q92896 1179 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 SLC9A7Q96T83 725 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 LRFN3Q9BTN0 628 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 ANO3Q9BYT9 981 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 C22orf23Q9BZE7 217 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 RNPEPQ9H4A4 650 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 AZI2Q9H6S1 392 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 SLC28A3Q9HAS3 691 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 KCNH7Q9NS40 1196 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 PDRG1Q9NUG6 133 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 THEGQ9P2T0 379 aa10.95□□□□□ -0.66
CHD7-208ENST00000528280 RRN3P2A6NIE6 340 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 RSPH10B2B2RC85 870 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 ATP9AO75110 1047 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 CDKL5O76039 1030 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 CXCL10P02778 98 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 RSPH10BP0C881 870 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 HOXC8P31273 242 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 KCNJ6P48051 423 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 SLC26A2P50443 739 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 ARHGAP4P98171 946 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 NTRK3Q16288 839 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 GALNT17Q6IS24 598 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 TAF2Q6P1X5 1199 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 PLPPR4Q7Z2D5 763 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 RSPH3Q86UC2 560 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 REXO1Q8N1G1 1221 aaKnown RBP10.94□□□□□ -0.66
CHD7-208ENST00000528280 CTAGE1Q96RT6 745 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 SLC26A6Q9BXS9 759 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 PBX4Q9BYU1 374 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 BCAS3Q9H6U6 928 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 JPH1Q9HDC5 661 aaPredicted RBP10.94□□□□□ -0.66
CHD7-208ENST00000528280 TBC1D22BQ9NU19 505 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 CXXC1Q9P0U4 656 aaPredicted RBP10.94□□□□□ -0.66
CHD7-208ENST00000528280 SLC9A2Q9UBY0 812 aa10.94□□□□□ -0.66
CHD7-208ENST00000528280 REV3LO60673 3130 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 GSTTP1A0A1W2PQM5 241 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 DEXIO95424 95 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 XBP1P17861 261 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 THPOP40225 353 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 USP11P51784 963 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 NLRP5P59047 1200 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 CCT2P78371 535 aaKnown RBP10.93□□□□□ -0.66
CHD7-208ENST00000528280 SETQ01105 290 aaPredicted RBP10.93□□□□□ -0.66
CHD7-208ENST00000528280 SP4Q02446 784 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 TOB2Q14106 344 aaPredicted RBP10.93□□□□□ -0.66
CHD7-208ENST00000528280 PKN1Q16512 942 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 TRIM71Q2Q1W2 868 aaKnown RBP10.93□□□□□ -0.66
CHD7-208ENST00000528280 ZNF618Q5T7W0 954 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 JAKMIP3Q5VZ66 844 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 TYW1BQ6NUM6 668 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 RPAINQ86UA6 219 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 ALYREFQ86V81 257 aaKnown RBP10.93□□□□□ -0.66
CHD7-208ENST00000528280 PPP1R13LQ8WUF5 828 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 GAS2L1Q99501 681 aaPredicted RBP10.93□□□□□ -0.66
CHD7-208ENST00000528280 AGO4Q9HCK5 861 aaKnown RBP10.93□□□□□ -0.66
CHD7-208ENST00000528280 SETD4Q9NVD3 440 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 TCEAL9Q9UHQ7 104 aa10.93□□□□□ -0.66
CHD7-208ENST00000528280 GRXCR1A8MXD5 290 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 TREHO43280 583 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 LGR5O75473 907 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 ATG7O95352 703 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 STAT5BP51692 787 aa10.92□□□□□ -0.66
CHD7-208ENST00000528280 ZNF200P98182 395 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms