RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PBX4Q9BYU1 374 aa37.68■■■■□ 3.62
SSSCA1-205ENST00000527920 RNPEPQ9H4A4 650 aa37.68■■■■□ 3.62
SSSCA1-205ENST00000527920 SSRP1Q08945 709 aaKnown RBP37.67■■■■□ 3.62
SSSCA1-205ENST00000527920 RAB30Q15771 203 aa37.67■■■■□ 3.62
SSSCA1-205ENST00000527920 TIFAQ96CG3 184 aa37.67■■■■□ 3.62
SSSCA1-205ENST00000527920 SDF4Q9BRK5 362 aa37.67■■■■□ 3.62
SSSCA1-205ENST00000527920 AGO4Q9HCK5 861 aaKnown RBP37.67■■■■□ 3.62
SSSCA1-205ENST00000527920 PKD2L1Q9P0L9 805 aa37.67■■■■□ 3.62
SSSCA1-205ENST00000527920 SLC9A2Q9UBY0 812 aa37.67■■■■□ 3.62
SSSCA1-205ENST00000527920 EMSYQ7Z589 1322 aa37.66■■■■□ 3.62
SSSCA1-205ENST00000527920 CXCL10P02778 98 aa37.66■■■■□ 3.62
SSSCA1-205ENST00000527920 WNT8BQ93098 351 aa37.66■■■■□ 3.62
SSSCA1-205ENST00000527920 FAM161BQ96MY7 647 aa37.66■■■■□ 3.62
SSSCA1-205ENST00000527920 SCN5AQ14524 2016 aa37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 PPFIA3O75145 1194 aa37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 CAND2O75155 1236 aa37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 DEXIO95424 95 aa37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 ARP10275 920 aa37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 ZNF76P36508 570 aa37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 GPNMBQ14956 572 aa37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 TRAF7Q6Q0C0 670 aa37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 FTOQ9C0B1 505 aaKnown RBP eCLIP37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 ERAP1Q9NZ08 941 aa37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 VPS54Q9P1Q0 977 aa37.65■■■■□ 3.62
SSSCA1-205ENST00000527920 NRCAMQ92823 1304 aa37.64■■■■□ 3.62
SSSCA1-205ENST00000527920 ZBBXA8MT70 800 aa37.64■■■■□ 3.62
SSSCA1-205ENST00000527920 GRXCR1A8MXD5 290 aa37.64■■■■□ 3.62
SSSCA1-205ENST00000527920 BAIAP3O94812 1187 aa37.64■■■■□ 3.62
SSSCA1-205ENST00000527920 ADAM17P78536 824 aa37.64■■■■□ 3.62
SSSCA1-205ENST00000527920 ANKRD1Q15327 319 aa37.64■■■■□ 3.62
SSSCA1-205ENST00000527920 LARP6Q9BRS8 491 aaKnown RBP37.64■■■■□ 3.62
SSSCA1-205ENST00000527920 SMARCAD1Q9H4L7 1026 aa37.64■■■■□ 3.62
SSSCA1-205ENST00000527920 TRIP12Q14669 1992 aaPredicted RBP37.63■■■■□ 3.61
SSSCA1-205ENST00000527920 FAM86B1E9PN63 330 aa37.63■■■■□ 3.61
SSSCA1-205ENST00000527920 ADAMTS3O15072 1205 aa37.63■■■■□ 3.61
SSSCA1-205ENST00000527920 LGR5O75473 907 aa37.63■■■■□ 3.61
SSSCA1-205ENST00000527920 FAM86B2P0C5J1 330 aa37.63■■■■□ 3.61
SSSCA1-205ENST00000527920 ITGB3BPQ13352 177 aaPredicted RBP37.63■■■■□ 3.61
SSSCA1-205ENST00000527920 ZNF618Q5T7W0 954 aa37.63■■■■□ 3.61
SSSCA1-205ENST00000527920 SETD4Q9NVD3 440 aa37.63■■■■□ 3.61
SSSCA1-205ENST00000527920 MSRAQ9UJ68 235 aa37.63■■■■□ 3.61
SSSCA1-205ENST00000527920 IGLV3-22A0A075B6J6 115 aa37.62■■■■□ 3.61
SSSCA1-205ENST00000527920 TREHO43280 583 aa37.62■■■■□ 3.61
SSSCA1-205ENST00000527920 COL6A3P12111 3177 aa37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 NBNO60934 754 aa37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 CDKL5O76039 1030 aa37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 ATP2A2P16615 1042 aaKnown RBP37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 PBX2P40425 430 aa37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 SETQ01105 290 aaPredicted RBP37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 STK3Q13188 491 aa37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 PLA2G4DQ86XP0 818 aa37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 PHOSPHO2Q8TCD6 241 aa37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 LMBR1Q8WVP7 490 aa37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 GLG1Q92896 1179 aa37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 SLC9A7Q96T83 725 aa37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 CDX2Q99626 313 aaPredicted RBP37.61■■■■□ 3.61
SSSCA1-205ENST00000527920 CIITAP33076 1130 aa37.6■■■■□ 3.61
SSSCA1-205ENST00000527920 ACTR2P61160 394 aa37.6■■■■□ 3.61
SSSCA1-205ENST00000527920 SLKQ9H2G2 1235 aaPredicted RBP37.6■■■■□ 3.61
SSSCA1-205ENST00000527920 ZNF576Q9H609 170 aa37.6■■■■□ 3.61
SSSCA1-205ENST00000527920 TPCN1Q9ULQ1 816 aa37.6■■■■□ 3.61
SSSCA1-205ENST00000527920 PFKFB2O60825 505 aa37.59■■■■□ 3.61
SSSCA1-205ENST00000527920 THPOP40225 353 aa37.59■■■■□ 3.61
SSSCA1-205ENST00000527920 NLRP5P59047 1200 aa37.59■■■■□ 3.61
SSSCA1-205ENST00000527920 CNKSR3Q6P9H4 555 aa37.59■■■■□ 3.61
SSSCA1-205ENST00000527920 AZI2Q9H6S1 392 aa37.59■■■■□ 3.61
SSSCA1-205ENST00000527920 PCDHA11Q9Y5I1 949 aa37.59■■■■□ 3.61
SSSCA1-205ENST00000527920 CDH23Q9H251 3354 aa37.59■■■■□ 3.61
SSSCA1-205ENST00000527920 TET1Q8NFU7 2136 aa37.58■■■■□ 3.61
SSSCA1-205ENST00000527920 ATG7O95352 703 aa37.58■■■■□ 3.61
SSSCA1-205ENST00000527920 SCRN1Q12765 414 aa37.58■■■■□ 3.61
SSSCA1-205ENST00000527920 GALNT17Q6IS24 598 aa37.58■■■■□ 3.61
SSSCA1-205ENST00000527920 RASGRP4Q8TDF6 673 aa37.58■■■■□ 3.61
SSSCA1-205ENST00000527920 PCYT2Q99447 389 aa37.58■■■■□ 3.61
SSSCA1-205ENST00000527920 C22orf23Q9BZE7 217 aa37.58■■■■□ 3.61
SSSCA1-205ENST00000527920 RSPH10B2B2RC85 870 aa37.57■■■■□ 3.6
SSSCA1-205ENST00000527920 RSPH10BP0C881 870 aa37.57■■■■□ 3.6
SSSCA1-205ENST00000527920 PPFIA1Q13136 1202 aa37.57■■■■□ 3.6
SSSCA1-205ENST00000527920 MBTPS1Q14703 1052 aa37.57■■■■□ 3.6
SSSCA1-205ENST00000527920 PLPPR4Q7Z2D5 763 aa37.57■■■■□ 3.6
SSSCA1-205ENST00000527920 DAGLBQ8NCG7 672 aa37.57■■■■□ 3.6
SSSCA1-205ENST00000527920 PCDHA4Q9UN74 947 aa37.57■■■■□ 3.6
SSSCA1-205ENST00000527920 STK36Q9NRP7 1315 aa37.57■■■■□ 3.6
SSSCA1-205ENST00000527920 IPO5O00410 1097 aaKnown RBP37.56■■■■□ 3.6
SSSCA1-205ENST00000527920 EFCAB14O75071 495 aa37.56■■■■□ 3.6
SSSCA1-205ENST00000527920 TAF2Q6P1X5 1199 aa37.56■■■■□ 3.6
SSSCA1-205ENST00000527920 RPAINQ86UA6 219 aa37.56■■■■□ 3.6
SSSCA1-205ENST00000527920 TNPO1Q92973 898 aaKnown RBP37.56■■■■□ 3.6
SSSCA1-205ENST00000527920 DHX15O43143 795 aaKnown RBP37.55■■■■□ 3.6
SSSCA1-205ENST00000527920 SLC26A2P50443 739 aa37.55■■■■□ 3.6
SSSCA1-205ENST00000527920 USP11P51784 963 aa37.55■■■■□ 3.6
SSSCA1-205ENST00000527920 AK2P54819 239 aa37.55■■■■□ 3.6
SSSCA1-205ENST00000527920 TBC1D22BQ9NU19 505 aa37.55■■■■□ 3.6
SSSCA1-205ENST00000527920 YBX2Q9Y2T7 364 aaKnown RBP37.55■■■■□ 3.6
SSSCA1-205ENST00000527920 IGKV6D-21A0A0A0MT36 114 aa37.54■■■■□ 3.6
SSSCA1-205ENST00000527920 ABHD14A-ACY1A0A1B0GW23 586 aa37.54■■■■□ 3.6
SSSCA1-205ENST00000527920 MBLAC1A4D2B0 266 aaPredicted RBP37.54■■■■□ 3.6
SSSCA1-205ENST00000527920 MARK3P27448 753 aa37.54■■■■□ 3.6
SSSCA1-205ENST00000527920 GRIK4Q16099 956 aa37.54■■■■□ 3.6
SSSCA1-205ENST00000527920 CCNE2O96020 404 aa37.53■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms