RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 ACVR2BQ13705 512 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 ATP2B3Q16720 1220 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 RSPO4Q2I0M5 234 aaPredicted RBP4.85□□□□□ -1.63
CHD7-205ENST00000527825 SHROOM1Q2M3G4 852 aaPredicted RBP4.85□□□□□ -1.63
CHD7-205ENST00000527825 PLA2G4EQ3MJ16 856 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 EFHC2Q5JST6 749 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 KIAA0319Q5VV43 1072 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 FAM117BQ6P1L5 589 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 SLC9A9Q8IVB4 645 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 MSL3Q8N5Y2 521 aaKnown RBP4.85□□□□□ -1.63
CHD7-205ENST00000527825 VGLL2Q8N8G2 317 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 C1orf216Q8TAB5 229 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 ABHD17AQ96GS6 310 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 SAMD11Q96NU1 681 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 PPP1R9BQ96SB3 815 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 RAD9AQ99638 391 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 PANK2Q9BZ23 570 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 KIAA1683Q9H0B3 1180 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 UPF3AQ9H1J1 476 aaKnown RBP4.85□□□□□ -1.63
CHD7-205ENST00000527825 TSPAN10Q9H1Z9 355 aaPredicted RBP4.85□□□□□ -1.63
CHD7-205ENST00000527825 MFSD1Q9H3U5 465 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 ALG13Q9NP73 1137 aaKnown RBP4.85□□□□□ -1.63
CHD7-205ENST00000527825 CD207Q9UJ71 328 aa4.85□□□□□ -1.63
CHD7-205ENST00000527825 MYO5AQ9Y4I1 1855 aaKnown RBP4.85□□□□□ -1.63
CHD7-205ENST00000527825 DCHS1Q96JQ0 3298 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.84□□□□□ -1.63
CHD7-205ENST00000527825 SHISA8B8ZZ34 492 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 FLOT1O75955 427 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 BAG3O95817 575 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 LMNAP02545 664 aaKnown RBP4.84□□□□□ -1.63
CHD7-205ENST00000527825 ZNF853P0CG23 659 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 ATP4AP20648 1035 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 PTMSP20962 102 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 NOS2P35228 1153 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 COPB2P35606 906 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 NDUFV1P49821 464 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 WDR5P61964 334 aaKnown RBP4.84□□□□□ -1.63
CHD7-205ENST00000527825 SNRPNP63162 240 aaKnown RBP4.84□□□□□ -1.63
CHD7-205ENST00000527825 FGD1P98174 961 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 MECOMQ03112 1051 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 TNFAIP2Q03169 654 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 SLFN5Q08AF3 891 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 GPM6BQ13491 265 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 BFSP2Q13515 415 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 TEAD4Q15561 434 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 CCDC27Q2M243 656 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 ABCB5Q2M3G0 1257 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 TWISTNBQ3B726 338 aaPredicted RBP4.84□□□□□ -1.63
CHD7-205ENST00000527825 ZNF792Q3KQV3 632 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 CCDC144BQ3MJ40 725 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 FAM47CQ5HY64 1035 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 SLC4A10Q6U841 1118 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 C1orf229Q6ZS94 237 aaPredicted RBP4.84□□□□□ -1.63
CHD7-205ENST00000527825 TMCO2Q7Z6W1 182 aaPredicted RBP4.84□□□□□ -1.63
CHD7-205ENST00000527825 MAPKAPK5Q8IW41 473 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 SMAP1Q8IYB5 467 aaPredicted RBP4.84□□□□□ -1.63
CHD7-205ENST00000527825 TSPYL6Q8N831 410 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 SLC43A3Q8NBI5 491 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 GALNT6Q8NCL4 622 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 FAM200AQ8TCP9 573 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 ZDHHC1Q8WTX9 485 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 ASIC4Q96FT7 647 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 SUCLG2Q96I99 432 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 RIPOR3Q96MK2 946 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 HAUS7Q99871 368 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 C17orf80Q9BSJ5 609 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 CRISPLD1Q9H336 500 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 SEMA4AQ9H3S1 761 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 ABHD16BQ9H3Z7 469 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 IGFLR1Q9H665 355 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 C1orf115Q9H7X2 142 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 GRPEL1Q9HAV7 217 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 NDFIP2Q9NV92 336 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 ZDHHC3Q9NYG2 299 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 CHMP5Q9NZZ3 219 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 RAI14Q9P0K7 980 aa4.84□□□□□ -1.63
CHD7-205ENST00000527825 SAP30BPQ9UHR5 308 aaKnown RBP4.84□□□□□ -1.63
CHD7-205ENST00000527825 ATXN7L1Q9ULK2 861 aaPredicted RBP4.84□□□□□ -1.63
CHD7-205ENST00000527825 RIF1Q5UIP0 2472 aaKnown RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 TRIOO75962 3097 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 SERTM1A2A2V5 107 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 F6X3S4 739 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 C2CD2LO14523 706 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 BNIP3LO60238 219 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 EFCAB14O75071 495 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 OFD1O75665 1012 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 ALDH1L1O75891 902 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 GJB5O95377 273 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 ITGB2P05107 769 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 IQCF3P0C7M6 154 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 BMP4P12644 408 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 FGFR3P22607 806 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 PHKA1P46020 1223 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 PSMA6P60900 246 aaKnown RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 PSMC6P62333 389 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 FSCN1Q16658 493 aaKnown RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 PTPN21Q16825 1174 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 CERKLQ49MI3 558 aaPredicted RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 HS1BP3Q53T59 392 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 ARSJQ5FYB0 599 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms