RNA–Protein interactions for RNA: ENST00000527537.5

RDX-203, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-203ENST00000527537 RAD21O60216 631 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 ATP9AO75110 1047 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 CHGBP05060 677 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 SKIP12755 728 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 MYL6BP14649 208 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 GM2AP17900 193 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 TTF1Q15361 905 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 MEX3CQ5U5Q3 659 aaKnown RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 TMEM53Q6P2H8 277 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 SAMD3Q8N6K7 520 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 RETREG2Q8NC44 543 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 SMC6Q96SB8 1091 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 MTFR1LQ9H019 292 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 THAP9Q9H5L6 903 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 C9orf78Q9NZ63 289 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 MYH2Q9UKX2 1941 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 NCAPD2Q15021 1401 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 BTBD11A6QL63 1104 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 PRPF3O43395 683 aaKnown RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 TROVE2P10155 538 aaKnown RBP eCLIP7.3□□□□□ -1.24
RDX-203ENST00000527537 XBP1P17861 261 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 ECHS1P30084 290 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 SKIV2L2P42285 1042 aaKnown RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 GPSM2P81274 684 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 HPCAP84074 193 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 CYP27A1Q02318 531 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 AIMP1Q12904 312 aaKnown RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 ZC2HC1CQ53FD0 456 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 ZNF530Q6P9A1 599 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 SCUBE1Q8IWY4 988 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 ABTB1Q969K4 478 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 MS4A14Q96JA4 679 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 CATSPER2Q96P56 530 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 POLR3CQ9BUI4 534 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 CCDC134Q9H6E4 229 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 NHEJ1Q9H9Q4 299 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 TUBA8Q9NY65 449 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 RNF14Q9UBS8 474 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 CROTQ9UKG9 612 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 USP15Q9Y4E8 981 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 MROH7Q68CQ1 1323 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 PRAMEF22A3QJZ6 481 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 EIF3FO00303 357 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 RXRBP28702 533 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 EIF4A1P60842 406 aaKnown RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 MAP7Q14244 749 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 HLTFQ14527 1009 aaKnown RBP eCLIP7.3□□□□□ -1.24
RDX-203ENST00000527537 PARP6Q2NL67 630 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 SMUG1Q53HV7 270 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 DAB2IPQ5VWQ8 1189 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 THOC7Q6I9Y2 204 aaKnown RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 ZNF280DQ6N043 979 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 MIGA2Q7L4E1 593 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 GET4Q7L5D6 327 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 CCDC65Q8IXS2 484 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 KRI1Q8N9T8 703 aaKnown RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 SNRNP27Q8WVK2 155 aaKnown RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 IRGQQ8WZA9 623 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 ISCUQ9H1K1 167 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 BOLA2Q9H3K6 86 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 TAB2Q9NYJ8 693 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 SUCLA2Q9P2R7 463 aaPredicted RBP7.3□□□□□ -1.24
RDX-203ENST00000527537 CAPN11Q9UMQ6 739 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 TBX22Q9Y458 520 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 DIP2AQ14689 1571 aa7.3□□□□□ -1.24
RDX-203ENST00000527537 PIK3C2AO00443 1686 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 ETS2P15036 469 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 TRPC1P48995 793 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 PDE6CP51160 858 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 UBXN1Q04323 297 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 MTMR3Q13615 1198 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 CWF19L2Q2TBE0 894 aaKnown RBP7.29□□□□□ -1.24
RDX-203ENST00000527537 KRT71Q3SY84 523 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 LIN52Q52LA3 116 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 OLFML2BQ68BL8 750 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 KANK3Q6NY19 840 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 KLC3Q6P597 504 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 PALB2Q86YC2 1186 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 FITM2Q8N6M3 262 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 SUPT20HQ8NEM7 779 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 UBLCP1Q8WVY7 318 aaPredicted RBP7.29□□□□□ -1.24
RDX-203ENST00000527537 KRT12Q99456 494 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 CCDC28BQ9BUN5 200 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 SH2D4AQ9H788 454 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 RXFP1Q9HBX9 757 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 LRWD1Q9UFC0 647 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 ZNF180Q9UJW8 692 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 PNMA2Q9UL42 364 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 CD2APQ9Y5K6 639 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 MST1RQ04912 1400 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 FAM208AQ9UK61 1670 aaKnown RBP7.29□□□□□ -1.24
RDX-203ENST00000527537 CACNA1FO60840 1977 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 PPP1R3GB7ZBB8 358 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 RGL2O15211 777 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 ACTN4O43707 911 aaKnown RBP7.29□□□□□ -1.24
RDX-203ENST00000527537 MOCS3O95396 460 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 RASA1P20936 1047 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 HOXA10P31260 410 aaPredicted RBP7.29□□□□□ -1.24
RDX-203ENST00000527537 MTTPP55157 894 aa7.29□□□□□ -1.24
RDX-203ENST00000527537 OCRLQ01968 901 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms