RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CDR2LQ86X02 465 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 TAGAPQ8N103 731 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 C17orf53Q8N3J3 647 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 SYT2Q8N9I0 419 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 RABGGTAQ92696 567 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 DPF3Q92784 378 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 QKIQ96PU8 341 aaKnown RBP eCLIP7.81□□□□□ -1.162e-8■■□□□ 14.5
CTNND1-216ENST00000527467 BRD8Q9H0E9 1235 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 BSDC1Q9NW68 430 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 ANAPC5Q9UJX4 755 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 BACH1O14867 736 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 OATP04181 439 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 HOXB7P09629 217 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 RPS8P62241 208 aaKnown RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 ALS2CLQ60I27 953 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 Q6ZUG5 572 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 CCDC149Q6ZUS6 474 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 SMC5Q8IY18 1101 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 NCLNQ969V3 563 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 FAM167BQ9BTA0 163 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 ZNF215Q9UL58 517 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 SOX13Q9UN79 622 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 PRG3Q9Y2Y8 225 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 XDHP47989 1333 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 NCF2P19878 526 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 INHBEP58166 350 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 YWHAEP62258 255 aaKnown RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 DENND6AQ8IWF6 608 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 LEMD3Q9Y2U8 911 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 CHEK2O96017 543 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 SLFN5Q08AF3 891 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 ICA1LQ8NDH6 482 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 GTF3C2Q8WUA4 911 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 PIGBQ92521 554 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 ZBTB18Q99592 522 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 KLC2Q9H0B6 622 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 BATF3Q9NR55 127 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 GID8Q9NWU2 228 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-216ENST00000527467 SEPT3Q9UH03 358 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 TRPC6Q9Y210 931 aa7.81□□□□□ -1.16
CTNND1-216ENST00000527467 SMCO2A6NFE2 343 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 PYGMP11217 842 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 OCRLQ01968 901 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 MYO1EQ12965 1108 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 MTX1Q13505 466 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 NFRKBQ6P4R8 1299 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 BTNL9Q6UXG8 535 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 NOSTRINQ8IVI9 506 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 ZFYVE19Q96K21 471 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 PHACTR3Q96KR7 559 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 DNAJC17Q9NVM6 304 aaKnown RBP7.8□□□□□ -1.16
CTNND1-216ENST00000527467 SUN2Q9UH99 717 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 GMEB1Q9Y692 573 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 SBNO2Q9Y2G9 1366 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 H0Y3Z8 333 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 EIF3DO15371 548 aaKnown RBP eCLIP7.8□□□□□ -1.16
CTNND1-216ENST00000527467 GYG2O15488 501 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 SCG2P13521 617 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 SLC9A1P19634 815 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 EPHB4P54760 987 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 AP2B1P63010 937 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 RUNX1T1Q06455 604 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 LRMPQ12912 555 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 PKN2Q16513 984 aaKnown RBP7.8□□□□□ -1.16
CTNND1-216ENST00000527467 KAZNQ674X7 775 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 SH3BP5LQ7L8J4 393 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 COL23A1Q86Y22 540 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-216ENST00000527467 PLD3Q8IV08 490 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 HIPK4Q8NE63 616 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 PLBD2Q8NHP8 589 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 C19orf60Q96EN9 201 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 PLIN2Q99541 437 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 SNX25Q9H3E2 840 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 SETBP1Q9Y6X0 1596 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 F8W031 263 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-216ENST00000527467 DGKZQ13574 1117 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 C4orf50Q6ZRC1 276 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 CATSPER3Q86XQ3 398 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 KRT73Q86Y46 540 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 CFAP36Q96G28 342 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 INTS4Q96HW7 963 aaKnown RBP7.8□□□□□ -1.16
CTNND1-216ENST00000527467 OSBPL10Q9BXB5 764 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 OLA1Q9NTK5 396 aaKnown RBP7.8□□□□□ -1.16
CTNND1-216ENST00000527467 COL15A1P39059 1388 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 USP17L8P0C7I0 530 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 GNAT2P19087 354 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 GUCY2DQ02846 1103 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 SF3B3Q15393 1217 aaKnown RBP7.8□□□□□ -1.16
CTNND1-216ENST00000527467 CCDC144BQ3MJ40 725 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 TYW1BQ6NUM6 668 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 ZNF653Q96CK0 615 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 LRRC2Q9BYS8 371 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 TAB2Q9NYJ8 693 aa7.8□□□□□ -1.16
CTNND1-216ENST00000527467 RBM8AQ9Y5S9 174 aaKnown RBP7.8□□□□□ -1.16
CTNND1-216ENST00000527467 TNS2Q63HR2 1409 aa7.79□□□□□ -1.16
CTNND1-216ENST00000527467 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-216ENST00000527467 ALDH1L1O75891 902 aa7.79□□□□□ -1.16
CTNND1-216ENST00000527467 NUP62P37198 522 aaPredicted RBP7.79□□□□□ -1.16
CTNND1-216ENST00000527467 ETF1P62495 437 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms