RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 HIPK3Q9H422 1215 aa12.75□□□□□ -0.37
CTSB-214ENST00000527243 TUT1Q9H6E5 874 aaKnown RBP12.75□□□□□ -0.37
CTSB-214ENST00000527243 JPH1Q9HDC5 661 aaPredicted RBP12.75□□□□□ -0.37
CTSB-214ENST00000527243 PKD2L1Q9P0L9 805 aa12.75□□□□□ -0.37
CTSB-214ENST00000527243 SLC9A2Q9UBY0 812 aa12.75□□□□□ -0.37
CTSB-214ENST00000527243 EMSYQ7Z589 1322 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 IGKV6D-21A0A0A0MT36 114 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 IPO5O00410 1097 aaKnown RBP12.74□□□□□ -0.37
CTSB-214ENST00000527243 XBP1P17861 261 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 CYP2C18P33260 490 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 TCF7P36402 384 aaPredicted RBP12.74□□□□□ -0.37
CTSB-214ENST00000527243 ZNF76P36508 570 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 SETQ01105 290 aaPredicted RBP12.74□□□□□ -0.37
CTSB-214ENST00000527243 SP4Q02446 784 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 TRIM71Q2Q1W2 868 aaKnown RBP12.74□□□□□ -0.37
CTSB-214ENST00000527243 FAM47CQ5HY64 1035 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 EARS2Q5JPH6 523 aaKnown RBP12.74□□□□□ -0.37
CTSB-214ENST00000527243 MOXD1Q6UVY6 613 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 C16orf59Q7L2K0 433 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 KRT25Q7Z3Z0 450 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 TDHQ8IZJ6 230 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 DOCK5Q9H7D0 1870 aa12.74□□□□□ -0.37
CTSB-214ENST00000527243 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 MSH4O15457 936 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 TDP2O95551 362 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 MMP1P03956 469 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 FXR1P51114 621 aaKnown RBP eCLIP12.73□□□□□ -0.37
CTSB-214ENST00000527243 ACTR2P61160 394 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 ZNF200P98182 395 aaPredicted RBP12.73□□□□□ -0.37
CTSB-214ENST00000527243 FPGSQ05932 587 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 NR5A1Q13285 461 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 NONOQ15233 471 aaKnown RBP eCLIP12.73□□□□□ -0.37
CTSB-214ENST00000527243 PTGISQ16647 500 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 INF2Q27J81 1249 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 LRIT3Q3SXY7 679 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 Q4G0T1 1027 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 PRR16Q569H4 304 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 C9orf50Q5SZB4 431 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 UTP14CQ5TAP6 766 aaKnown RBP12.73□□□□□ -0.37
CTSB-214ENST00000527243 KRT40Q6A162 431 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 B3GNT9Q6UX72 402 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 ABHD15Q6UXT9 468 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 C7orf31Q8N865 590 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 WNT8BQ93098 351 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 SDF4Q9BRK5 362 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 RNPEPQ9H4A4 650 aa12.73□□□□□ -0.37
CTSB-214ENST00000527243 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 ST18O60284 1047 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 CSF2RAP15509 400 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 HMGN5P82970 282 aaKnown RBP12.72□□□□□ -0.37
CTSB-214ENST00000527243 SHHQ15465 462 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 TRAF7Q6Q0C0 670 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 SERINC5Q86VE9 423 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 ETNPPLQ8TBG4 499 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 SLC5A5Q92911 643 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 TMX3Q96JJ7 454 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 ZNF577Q9BSK1 485 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 TBC1D22BQ9NU19 505 aa12.72□□□□□ -0.37
CTSB-214ENST00000527243 ZNF215Q9UL58 517 aaPredicted RBP12.72□□□□□ -0.37
CTSB-214ENST00000527243 CCDC194A0A1B0GVG4 234 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 BTBD18B2RXH4 712 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 SOX1O00570 391 aaPredicted RBP12.71□□□□□ -0.37
CTSB-214ENST00000527243 KRT2P35908 639 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 CCL23P55773 120 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 CHMP4BP1P59074 171 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 PTK7Q13308 1070 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 PPIGQ13427 754 aaKnown RBP eCLIP12.71□□□□□ -0.372e-12■□□□□ 8.5
CTSB-214ENST00000527243 GPNMBQ14956 572 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 TMEM240Q5SV17 173 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 RASIP1Q5U651 963 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 PPP4R3AQ6IN85 833 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 ZNF746Q6NUN9 644 aaPredicted RBP12.71□□□□□ -0.37
CTSB-214ENST00000527243 PLPPR4Q7Z2D5 763 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 NEK8Q86SG6 692 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 HSCBQ8IWL3 235 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 DIS3L2Q8IYB7 885 aaKnown RBP12.71□□□□□ -0.37
CTSB-214ENST00000527243 TMEM199Q8N511 208 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 CAGE1Q8TC20 777 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 AFAP1L1Q8TED9 768 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 RIT2Q99578 217 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 SMARCAD1Q9H4L7 1026 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 KCNMB3Q9NPA1 279 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 ERAP1Q9NZ08 941 aa12.71□□□□□ -0.37
CTSB-214ENST00000527243 C17orf102A2RUQ5 167 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 MBLAC1A4D2B0 266 aaPredicted RBP12.7□□□□□ -0.38
CTSB-214ENST00000527243 SLC37A4O43826 429 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 PSMD10O75832 226 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 IQCF3P0C7M6 154 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 GCFC2P16383 781 aaKnown RBP12.7□□□□□ -0.38
CTSB-214ENST00000527243 MCM2P49736 904 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 KRT76Q01546 638 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 PIK3AP1Q6ZUJ8 805 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 CCDC60Q8IWA6 550 aaPredicted RBP12.7□□□□□ -0.38
CTSB-214ENST00000527243 FBXO18Q8NFZ0 1043 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 LMBR1Q8WVP7 490 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 UIMC1Q96RL1 719 aa12.7□□□□□ -0.38
CTSB-214ENST00000527243 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.7□□□□□ -0.389e-8■■■■■ 55.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms