RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 OSBPL9Q96SU4 736 aa11.91□□□□□ -0.5
PTPMT1-204ENST00000527079 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
PTPMT1-204ENST00000527079 TBC1D7Q9P0N9 293 aa11.91□□□□□ -0.5
PTPMT1-204ENST00000527079 RNF14Q9UBS8 474 aa11.91□□□□□ -0.5
PTPMT1-204ENST00000527079 FAM198AQ9UFP1 575 aa11.91□□□□□ -0.5
PTPMT1-204ENST00000527079 DNM3Q9UQ16 869 aa11.91□□□□□ -0.5
PTPMT1-204ENST00000527079 SPDYE3A6NKU9 549 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 F5H6K3 240 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 SREBF1P36956 1147 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 GFPT1Q06210 699 aaPredicted RBP11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 KLRC3Q07444 240 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 CATSPER3Q86XQ3 398 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 SIAH1Q8IUQ4 282 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 NELFCDQ8IXH7 590 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 SYT2Q8N9I0 419 aaPredicted RBP11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 COG1Q8WTW3 980 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 FGFBP2Q9BYJ0 223 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 TRAF3IP3Q9Y228 551 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 NPHP3-ACAD11A0A0J9YXS1 232 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 CIITAP33076 1130 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 EPS15P42566 896 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 C2orf54Q08AI8 447 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 TCP10Q12799 353 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 ABCB5Q2M3G0 1257 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 PRR16Q569H4 304 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 MUM1L1Q5H9M0 696 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 DACT2Q5SW24 774 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 FRMD5Q7Z6J6 570 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 KIAA0825Q8IV33 1275 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 NLRC4Q9NPP4 1024 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 AIPL1Q9NZN9 384 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 SYNPO2Q9UMS6 1093 aa11.9□□□□□ -0.5
PTPMT1-204ENST00000527079 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 TLR2O60603 784 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 N4BP1O75113 896 aaKnown RBP11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 POTEIP0CG38 1075 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 ERCC3P19447 782 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 STAT3P40763 770 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 PAFAH1B1P43034 410 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 TNNT3P45378 269 aaPredicted RBP11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 RBM5P52756 815 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 POLR2FP61218 127 aaKnown RBP11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 RASSF7Q02833 373 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 GIT2Q14161 759 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 CCDC181Q5TID7 509 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 SYDE2Q5VT97 1194 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 POTEGQ6S5H5 508 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 POTEEQ6S8J3 1075 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 BTNL9Q6UXG8 535 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 SH3BP5LQ7L8J4 393 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 SPATA4Q8NEY3 305 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 QTRT2Q9H974 415 aaKnown RBP11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 HPCAL4Q9UM19 191 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 FAN1Q9Y2M0 1017 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 BRWD3Q6RI45 1802 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 KIF13BQ9NQT8 1826 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 FAM196BA6NMK8 535 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 NDUFB10O96000 172 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 SLURP2P0DP57 97 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 LMAN1P49257 510 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 CACNB3P54284 484 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 GYS2P54840 703 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 HNRNPH2P55795 449 aaKnown RBP11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 TRAF1Q13077 416 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 SLC18A3Q16572 532 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 EPM2AIP1Q7L775 607 aaPredicted RBP11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 GOLGA5Q8TBA6 731 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 LENG9Q96B70 501 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 PLCB1Q9NQ66 1216 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 ATRNL1Q5VV63 1379 aa11.89□□□□□ -0.51
PTPMT1-204ENST00000527079 ZNF646O15015 1829 aaPredicted RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 SCN9AQ15858 1988 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 A0A0U1RQG5 324 aaPredicted RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 PDXKO00764 312 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 CALUO43852 315 aaPredicted RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 ENTPD3O75355 529 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 CYP3A4P08684 503 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 SPATA31C1P0DKV0 1188 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 NR2F2P24468 414 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 CACNB1Q02641 598 aaPredicted RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 KCNH2Q12809 1159 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 NAB2Q15742 525 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 KNOP1Q1ED39 458 aaKnown RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 GLE1Q53GS7 698 aaKnown RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 C10orf76Q5T2E6 689 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 KLHDC7AQ5VTJ3 777 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 NFRKBQ6P4R8 1299 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 DRC1Q96MC2 740 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 P2RX7Q99572 595 aaKnown RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 POLR3CQ9BUI4 534 aaPredicted RBP11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 TLR10Q9BXR5 811 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 GANQ9H2C0 597 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 KCNQ5Q9NR82 932 aa11.88□□□□□ -0.51
PTPMT1-204ENST00000527079 SALL4Q9UJQ4 1053 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms