RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 PCDHA8Q9Y5H6 950 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 MICAL3Q7RTP6 2002 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 LOXHD1Q8IVV2 1947 aa11.97□□□□□ -0.49
RBBP4-216ENST00000525506 CPLX1O14810 134 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 PPFIA3O75145 1194 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 ARHGEF15O94989 841 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 SEC24BO95487 1268 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 ACTN1P12814 892 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 GNA11P29992 359 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 CLK2P49760 499 aaKnown RBP11.96□□□□□ -0.49
RBBP4-216ENST00000525506 ADCY7P51828 1080 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 PTK7Q13308 1070 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 PKN1Q16512 942 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 TRAF7Q6Q0C0 670 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 NLRX1Q86UT6 975 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.96□□□□□ -0.49
RBBP4-216ENST00000525506 PPM1EQ8WY54 764 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 ATP6V0A1Q93050 837 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 SENP7Q9BQF6 1050 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 RNPEPQ9H4A4 650 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 SLC28A3Q9HAS3 691 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 TMEM260Q9NX78 707 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 PCDHA11Q9Y5I1 949 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 UBIAD1Q9Y5Z9 338 aa11.96□□□□□ -0.49
RBBP4-216ENST00000525506 STK36Q9NRP7 1315 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 C17orf102A2RUQ5 167 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 SMCO2A6NFE2 343 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 ADAMTS3O15072 1205 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 MAFGO15525 162 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 TREHO43280 583 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 PFKFB2O60825 505 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 DEXIO95424 95 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 KCNA2P16389 499 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 THPOP40225 353 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 RBM25P49756 843 aaKnown RBP11.95□□□□□ -0.5
RBBP4-216ENST00000525506 RBL2Q08999 1139 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 ADGRE1Q14246 886 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 MBTPS1Q14703 1052 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 SERINC5Q86VE9 423 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 GIMAP8Q8ND71 665 aaPredicted RBP11.95□□□□□ -0.5
RBBP4-216ENST00000525506 CYP2W1Q8TAV3 490 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 BICD2Q8TD16 824 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 GPRASP2Q96D09 838 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 OSBPL7Q9BZF2 842 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 CERS4Q9HA82 394 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 SETD4Q9NVD3 440 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 SIP14410 1827 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 REV3LO60673 3130 aa11.95□□□□□ -0.5
RBBP4-216ENST00000525506 WDR81Q562E7 1941 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 GSTTP1A0A1W2PQM5 241 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 RFXAPO00287 272 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 CA3P07451 260 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 IGFBP4P22692 258 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 HOXC8P31273 242 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 TCF7P36402 384 aaPredicted RBP11.94□□□□□ -0.5
RBBP4-216ENST00000525506 SREBF1P36956 1147 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 AK2P54819 239 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 WDR5P61964 334 aaKnown RBP11.94□□□□□ -0.5
RBBP4-216ENST00000525506 CCT2P78371 535 aaKnown RBP11.94□□□□□ -0.5
RBBP4-216ENST00000525506 DEFB103AP81534 67 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 MTMR1Q13613 665 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 CCDC85BQ15834 202 aaPredicted RBP11.94□□□□□ -0.5
RBBP4-216ENST00000525506 PPP2R2DQ66LE6 453 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 SPRED2Q7Z698 418 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 PHKBQ93100 1093 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 UIMC1Q96RL1 719 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 GAS2L1Q99501 681 aaPredicted RBP11.94□□□□□ -0.5
RBBP4-216ENST00000525506 SLC26A6Q9BXS9 759 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 SLKQ9H2G2 1235 aaPredicted RBP11.94□□□□□ -0.5
RBBP4-216ENST00000525506 UPF2Q9HAU5 1272 aaKnown RBP11.94□□□□□ -0.5
RBBP4-216ENST00000525506 NCOA5Q9HCD5 579 aaKnown RBP11.94□□□□□ -0.5
RBBP4-216ENST00000525506 C6orf50Q9HD87 102 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 JADE2Q9NQC1 790 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 PRDM6Q9NQX0 595 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 TPCN1Q9ULQ1 816 aa11.94□□□□□ -0.5
RBBP4-216ENST00000525506 PRRC2BQ5JSZ5 2229 aaKnown RBP11.94□□□□□ -0.5
RBBP4-216ENST00000525506 EVPLQ92817 2033 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 MYH9P35579 1960 aaKnown RBP11.93□□□□□ -0.5
RBBP4-216ENST00000525506 EPOPA6NHQ4 379 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 CXCL10P02778 98 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 CTSHP09668 335 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 ARP10275 920 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 MARK3P27448 753 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 NEK4P51957 841 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 SSRP1Q08945 709 aaKnown RBP11.93□□□□□ -0.5
RBBP4-216ENST00000525506 SCRN1Q12765 414 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 CNKSR3Q6P9H4 555 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 NIPA1Q7RTP0 329 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 HERC6Q8IVU3 1022 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 REXO1Q8N1G1 1221 aaKnown RBP11.93□□□□□ -0.5
RBBP4-216ENST00000525506 CRYGNQ8WXF5 182 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 SLC9A7Q96T83 725 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 MXRA8Q9BRK3 442 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 LARP6Q9BRS8 491 aaKnown RBP11.93□□□□□ -0.5
RBBP4-216ENST00000525506 ANO3Q9BYT9 981 aa11.93□□□□□ -0.5
RBBP4-216ENST00000525506 TRANK1O15050 2925 aa11.92□□□□□ -0.5
RBBP4-216ENST00000525506 LCHNA4D1U4 455 aa11.92□□□□□ -0.5
RBBP4-216ENST00000525506 RSPH10B2B2RC85 870 aa11.92□□□□□ -0.5
RBBP4-216ENST00000525506 BAIAP3O94812 1187 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms