RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PEX2P28328 305 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 NPTX2P47972 431 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 CASP5P51878 434 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 SIK1P57059 783 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 TMF1P82094 1093 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 OCRLQ01968 901 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 MLECQ14165 292 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 SPARCL1Q14515 664 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 PARP10Q53GL7 1025 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 CC2D1BQ5T0F9 858 aaKnown RBP5.13□□□□□ -1.59
CD44-213ENST00000525209 RNF220Q5VTB9 566 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 CDCP2Q5VXM1 449 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 ISM2Q6H9L7 571 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 LLGL2Q6P1M3 1020 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 PGBD2Q6P3X8 592 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 MCM10Q7L590 875 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 LYSMD3Q7Z3D4 306 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 SDCCAG8Q86SQ7 713 aaPredicted RBP5.13□□□□□ -1.59
CD44-213ENST00000525209 DDX53Q86TM3 631 aaKnown RBP5.13□□□□□ -1.59
CD44-213ENST00000525209 GALNT13Q8IUC8 556 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 LRRN4CLQ8ND94 238 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 PPP1R35Q8TAP8 253 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 RHBDD1Q8TEB9 315 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 ASB12Q8WXK4 309 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 NANOS1Q8WY41 292 aaKnown RBP5.13□□□□□ -1.59
CD44-213ENST00000525209 KCTD13Q8WZ19 329 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 TRERF1Q96PN7 1200 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 OSMRQ99650 979 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 ADPGKQ9BRR6 497 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 GTPBP4Q9BZE4 634 aaKnown RBP5.13□□□□□ -1.59
CD44-213ENST00000525209 CCDC68Q9H2F9 335 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 ZNF576Q9H609 170 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 C11orf16Q9NQ32 467 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 CFDP1Q9UEE9 299 aaPredicted RBP5.13□□□□□ -1.59
CD44-213ENST00000525209 MKL2Q9ULH7 1088 aa5.13□□□□□ -1.59
CD44-213ENST00000525209 NESP48681 1621 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 A0A096LPE4 126 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 A0A1W2PPZ6 126 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 FAM86C2PA6NEL3 165 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 B4DLN1 442 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 H7C0S8 307 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 ADAMTS3O15072 1205 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 NCK2O43639 380 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 DLX3O60479 287 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 MAFO75444 373 aaPredicted RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 GLRX3O76003 335 aaKnown RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 KRT1P04264 644 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 POLBP06746 335 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 VEGFAP15692 232 aaPredicted RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 TECP42680 631 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 MRE11P49959 708 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 PMS1P54277 932 aaKnown RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 CACNB3P54284 484 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 PTPN11Q06124 597 aaPredicted RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 PPP2R3AQ06190 1150 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 TRIM29Q14134 588 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 E2F5Q15329 346 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 BBS9Q3SYG4 887 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 FAM209BQ5JX69 171 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 ARMC4Q5T2S8 1044 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 SCARA3Q6AZY7 606 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 ABHD17CQ6PCB6 329 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 UNC5DQ6UXZ4 953 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 MAMDC2Q7Z304 686 aaPredicted RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 NBPF5PQ86XG9 351 aaPredicted RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 VSIG1Q86XK7 387 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 GRAMD1CQ8IYS0 662 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 CACNA2D3Q8IZS8 1091 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 WHAMMQ8TF30 809 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 DPF3Q92784 378 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 TMEM41AQ96HV5 264 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 ZSCAN10Q96SZ4 725 aaPredicted RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 SDF4Q9BRK5 362 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 ANP32EQ9BTT0 268 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 KATNAL1Q9BW62 490 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 KIAA1683Q9H0B3 1180 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 DHX36Q9H2U1 1008 aaKnown RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 CYP4F11Q9HBI6 524 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 ZNF277Q9NRM2 450 aaPredicted RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 OLA1Q9NTK5 396 aaKnown RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 THG1LQ9NWX6 298 aaKnown RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 ZDHHC3Q9NYG2 299 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 JAG2Q9Y219 1238 aa5.12□□□□□ -1.59
CD44-213ENST00000525209 RRP7AQ9Y3A4 280 aaKnown RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 ZCCHC6Q5VYS8 1495 aaKnown RBP5.12□□□□□ -1.59
CD44-213ENST00000525209 BLACEA4D250 179 aa5.11□□□□□ -1.59
CD44-213ENST00000525209 METTL12A8MUP2 240 aa5.11□□□□□ -1.59
CD44-213ENST00000525209 H0Y3Z8 333 aa5.11□□□□□ -1.59
CD44-213ENST00000525209 RTCAO00442 366 aaKnown RBP5.11□□□□□ -1.59
CD44-213ENST00000525209 H2AFYO75367 372 aaKnown RBP5.11□□□□□ -1.59
CD44-213ENST00000525209 CRTAMO95727 393 aa5.11□□□□□ -1.59
CD44-213ENST00000525209 MYCLP12524 364 aaPredicted RBP5.11□□□□□ -1.59
CD44-213ENST00000525209 CNTFP26441 200 aa5.11□□□□□ -1.59
CD44-213ENST00000525209 CASQ1P31415 396 aa5.11□□□□□ -1.59
CD44-213ENST00000525209 HPDP32754 393 aaPredicted RBP5.11□□□□□ -1.59
CD44-213ENST00000525209 ATP6V1E1P36543 226 aa5.11□□□□□ -1.59
CD44-213ENST00000525209 LIFRP42702 1097 aa5.11□□□□□ -1.59
CD44-213ENST00000525209 TUBP50607 506 aa5.11□□□□□ -1.59
CD44-213ENST00000525209 RNF144AP50876 292 aaPredicted RBP5.11□□□□□ -1.59
CD44-213ENST00000525209 ZNF157P51786 506 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms