RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 IL6STP40189 918 aaPredicted RBP6.46□□□□□ -1.38
USP47-204ENST00000525078 GSK3AP49840 483 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 MAPK10P53779 464 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 POU4F1Q01851 419 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 ICA1Q05084 483 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 CYP4F3Q08477 520 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 CRY1Q16526 586 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 KIZQ2M2Z5 673 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 DGKKQ5KSL6 1271 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 CREB3L3Q68CJ9 461 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 USP45Q70EL2 814 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 GPR155Q7Z3F1 870 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 PPP1R13LQ8WUF5 828 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 KIAA1191Q96A73 305 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 ZDHHC5Q9C0B5 715 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 PRDM14Q9GZV8 571 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 MS4A5Q9H3V2 200 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 PCIF1Q9H4Z3 704 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 RASSF1Q9NS23 344 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 PPP1R9AQ9ULJ8 1098 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 MAGED2Q9UNF1 606 aaPredicted RBP6.46□□□□□ -1.38
USP47-204ENST00000525078 GPR45Q9Y5Y3 372 aa6.46□□□□□ -1.38
USP47-204ENST00000525078 A6NCN8 305 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 RRN3P2A6NIE6 340 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 SOBPA7XYQ1 873 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 MEIS1O00470 390 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 KPNA5O15131 536 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 NCAM2O15394 837 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 B3GALT2O43825 422 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 ORC4O43929 436 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 NDUFS2O75306 463 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 TBC1D8O95759 1140 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 BMP4P12644 408 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 OSMP13725 252 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 PDCP20941 246 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 AGXTP21549 392 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 NTF4P34130 210 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 PIK3CBP42338 1070 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 PHC1P78364 1004 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 SRSF2Q01130 221 aaKnown RBP6.45□□□□□ -1.38
USP47-204ENST00000525078 BLMHQ13867 455 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 TOR2AQ5JU69 321 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 INTS11Q5TA45 600 aaKnown RBP6.45□□□□□ -1.38
USP47-204ENST00000525078 CWF19L1Q69YN2 538 aaKnown RBP6.45□□□□□ -1.38
USP47-204ENST00000525078 NPNTQ6UXI9 565 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 C1orf122Q6ZSJ8 110 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 FRMD7Q6ZUT3 714 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 C16orf59Q7L2K0 433 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 ZNF610Q8N9Z0 462 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 KLHL23Q8NBE8 558 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 FRS2Q8WU20 508 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 SSH1Q8WYL5 1049 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 TBC1D20Q96BZ9 403 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 ACAP3Q96P50 834 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 BOCQ9BWV1 1114 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 SLC26A6Q9BXS9 759 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 ATXN3LQ9H3M9 355 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 IPPKQ9H8X2 491 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 SP110Q9HB58 689 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 IFT122Q9HBG6 1241 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 CRIM1Q9NZV1 1036 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 L1RE1Q9UN81 338 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 AP4E1Q9UPM8 1137 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 SPO11Q9Y5K1 396 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 SNX13Q9Y5W8 968 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 NPFFR2Q9Y5X5 522 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 ST14Q9Y5Y6 855 aa6.45□□□□□ -1.38
USP47-204ENST00000525078 SETD1BQ9UPS6 1966 aaKnown RBP6.44□□□□□ -1.38
USP47-204ENST00000525078 A0A087WV62 115 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 A0A1B0GVC2 190 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 C2orf71A6NGG8 1288 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 CAPN8A6NHC0 703 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 FAM47E-STBD1D6RA91 191 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 H0Y8X5 98 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 CD3EP07766 207 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 YBX3P16989 372 aaKnown RBP eCLIP6.44□□□□□ -1.38
USP47-204ENST00000525078 CALRP27797 417 aaKnown RBP6.44□□□□□ -1.38
USP47-204ENST00000525078 CAP2P40123 477 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 TECP42680 631 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 RXRGP48443 463 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 FXR1P51114 621 aaKnown RBP eCLIP6.44□□□□□ -1.38
USP47-204ENST00000525078 SMAD3P84022 425 aaKnown RBP6.44□□□□□ -1.38
USP47-204ENST00000525078 ALDH6A1Q02252 535 aaKnown RBP6.44□□□□□ -1.38
USP47-204ENST00000525078 PTSQ03393 145 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 TTLL4Q14679 1199 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 PDCD1Q15116 288 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 CNN3Q15417 329 aaKnown RBP6.44□□□□□ -1.38
USP47-204ENST00000525078 SMAD2Q15796 467 aaKnown RBP6.44□□□□□ -1.38
USP47-204ENST00000525078 TAF12Q16514 161 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 PGS1Q32NB8 556 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 ALDH1L2Q3SY69 923 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 FAM133BQ5BKY9 247 aaKnown RBP6.44□□□□□ -1.38
USP47-204ENST00000525078 IZUMO3Q5VZ72 239 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 PDXDC1Q6P996 788 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 FOXR1Q6PIV2 292 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 RINLQ6ZS11 566 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 UBE3DQ7Z6J8 389 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 CREBRFQ8IUR6 639 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 KIAA0319LQ8IZA0 1049 aa6.44□□□□□ -1.38
USP47-204ENST00000525078 KRT78Q8N1N4 520 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms