RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 BPNT1O95861 308 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 SSBP05455 408 aaKnown RBP eCLIP8.97□□□□□ -0.97
NEDD8-203ENST00000524927 MAOBP27338 520 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 NASPP49321 788 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-203ENST00000524927 PKN1Q16512 942 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 MAP4K3Q8IVH8 894 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 GATAD2BQ8WXI9 593 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 TRIM43Q96BQ3 446 aaPredicted RBP8.97□□□□□ -0.97
NEDD8-203ENST00000524927 WRNIP1Q96S55 665 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 GINM1Q9NU53 330 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 MSRAQ9UJ68 235 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 GJD2Q9UKL4 321 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 SLC45A1Q9Y2W3 748 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 PCDHAC2Q9Y5I4 1007 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 FLNBO75369 2602 aaKnown RBP8.97□□□□□ -0.97
NEDD8-203ENST00000524927 DNM1LO00429 736 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 MCM4P33991 863 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 NLRP12P59046 1061 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 FPGSQ05932 587 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 ZNF252P-AS1Q0IIN9 211 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 SNX17Q15036 470 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 SETDB1Q15047 1291 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 SEZ6Q53EL9 994 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 PRR23CQ6ZRP0 262 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 PDZD3Q86UT5 571 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 MCF2L2Q86YR7 1114 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 DTWD1Q8N5C7 304 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 FBXO27Q8NI29 283 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 USP26Q9BXU7 913 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 SLC28A3Q9HAS3 691 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 PRRC2BQ5JSZ5 2229 aaKnown RBP8.96□□□□□ -0.98
NEDD8-203ENST00000524927 PLXNA1Q9UIW2 1896 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 ZNF292O60281 2723 aa8.96□□□□□ -0.98
NEDD8-203ENST00000524927 CRKP46108 304 aa8.95□□□□□ -0.98
NEDD8-203ENST00000524927 HNRNPUQ00839 825 aaKnown RBP eCLIP8.95□□□□□ -0.98
NEDD8-203ENST00000524927 ST3GAL2Q16842 350 aa8.95□□□□□ -0.98
NEDD8-203ENST00000524927 FAM110CQ1W6H9 321 aa8.95□□□□□ -0.98
NEDD8-203ENST00000524927 CWF19L2Q2TBE0 894 aaKnown RBP8.95□□□□□ -0.98
NEDD8-203ENST00000524927 IGF2-ASQ6U949 168 aa8.95□□□□□ -0.98
NEDD8-203ENST00000524927 SLC39A5Q6ZMH5 540 aa8.95□□□□□ -0.98
NEDD8-203ENST00000524927 GALNT11Q8NCW6 608 aa8.95□□□□□ -0.98
NEDD8-203ENST00000524927 CPLX3Q8WVH0 158 aa8.95□□□□□ -0.98
NEDD8-203ENST00000524927 TACC3Q9Y6A5 838 aa8.95□□□□□ -0.98
NEDD8-203ENST00000524927 AOX1Q06278 1338 aa8.95□□□□□ -0.98
NEDD8-203ENST00000524927 MYBBP1AQ9BQG0 1328 aaKnown RBP8.95□□□□□ -0.98
NEDD8-203ENST00000524927 MAP1BP46821 2468 aaKnown RBP8.94□□□□□ -0.98
NEDD8-203ENST00000524927 GRXCR1A8MXD5 290 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 CXCL11O14625 94 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 DDX3YO15523 660 aaKnown RBP8.94□□□□□ -0.98
NEDD8-203ENST00000524927 STK10O94804 968 aaKnown RBP8.94□□□□□ -0.98
NEDD8-203ENST00000524927 ECEL1O95672 775 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 FGRP09769 529 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 PTPN11Q06124 597 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-203ENST00000524927 CACNB2Q08289 660 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-203ENST00000524927 MPP2Q14168 576 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 TRIM60Q495X7 471 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 SCARA3Q6AZY7 606 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 FASTKD5Q7L8L6 764 aaKnown RBP8.94□□□□□ -0.98
NEDD8-203ENST00000524927 DGLUCYQ7Z3D6 616 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 GPBAR1Q8TDU6 330 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 SMCR8Q8TEV9 937 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-203ENST00000524927 GAL3ST3Q96A11 431 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 HOOK2Q96ED9 719 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 DNAJC2Q99543 621 aaKnown RBP8.94□□□□□ -0.98
NEDD8-203ENST00000524927 ZNF70Q9UC06 446 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-203ENST00000524927 PCDHA4Q9UN74 947 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 MTCH2Q9Y6C9 303 aa8.94□□□□□ -0.98
NEDD8-203ENST00000524927 USP24Q9UPU5 2620 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 FAM221AA4D161 298 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 CILPO75339 1184 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 MED26O95402 600 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 CCND3P30281 292 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-203ENST00000524927 CD68P34810 354 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-203ENST00000524927 BMP8AQ7Z5Y6 402 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 SLITRK4Q8IW52 837 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 DZIP1LQ8IYY4 767 aaKnown RBP8.93□□□□□ -0.98
NEDD8-203ENST00000524927 LPAR1Q92633 364 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 TMEM39BQ9GZU3 492 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 CCDC86Q9H6F5 360 aaKnown RBP8.93□□□□□ -0.98
NEDD8-203ENST00000524927 FAM86C1Q9NVL1 165 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 GAKO14976 1311 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 A0A0G2JMZ2 1700 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 ARAP2Q8WZ64 1704 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 MYO15AQ9UKN7 3530 aa8.93□□□□□ -0.98
NEDD8-203ENST00000524927 RLFQ13129 1914 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 KIAA0355O15063 1070 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 MSCO60682 206 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 SOX9P48436 509 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 RPL6Q02878 288 aaKnown RBP8.92□□□□□ -0.98
NEDD8-203ENST00000524927 HP1BP3Q5SSJ5 553 aaPredicted RBP8.92□□□□□ -0.98
NEDD8-203ENST00000524927 CCDC174Q6PII3 467 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 ASCL5Q7RTU5 278 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 CERS5Q8N5B7 392 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 ANKRD13CQ8N6S4 541 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 ATOH1Q92858 354 aaPredicted RBP8.92□□□□□ -0.98
NEDD8-203ENST00000524927 LRRC3Q9BY71 257 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 NRSN2Q9GZP1 204 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 NKX2-4Q9H2Z4 354 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 KRT82Q9NSB4 513 aa8.92□□□□□ -0.98
NEDD8-203ENST00000524927 BRWD1Q9NSI6 2320 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms