RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 PTPRFP10586 1907 aa21.5■■□□□ 1.03
TM9SF1-203ENST00000524835 KRT18P05783 430 aaKnown RBP21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 EIF2AK2P19525 551 aaKnown RBP21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 RBL2Q08999 1139 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 PGM5Q15124 567 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 NSMFQ6X4W1 530 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 FAM114A1Q8IWE2 563 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 ZNF507Q8TCN5 953 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 REEP2Q9BRK0 252 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 JADE2Q9NQC1 790 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 PXMP2Q9NR77 195 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 MYPNQ86TC9 1320 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 GYPCP04921 128 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 MUTP22033 750 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 ZCWPW2Q504Y3 356 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 HERC4Q5GLZ8 1057 aaPredicted RBP21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 C16orf45Q96MC5 204 aaPredicted RBP21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 RMDN3Q96TC7 470 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 PDCD2LQ9BRP1 358 aa21.49■■□□□ 1.03
TM9SF1-203ENST00000524835 SPDYE16A6NNV3 312 aaPredicted RBP21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 AKR1B15C9JRZ8 316 aaPredicted RBP21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 DHX15O43143 795 aaKnown RBP21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 PPP1R12BO60237 982 aaPredicted RBP21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 UBXN1Q04323 297 aa21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 EPHA7Q15375 998 aa21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 PPFIBP1Q86W92 1011 aa21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 TPH2Q8IWU9 490 aa21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 PURBQ96QR8 312 aaKnown RBP21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 BAG1Q99933 345 aaPredicted RBP21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 TUBGCP2Q9BSJ2 902 aa21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 RUSC1Q9BVN2 902 aa21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 AGO4Q9HCK5 861 aaKnown RBP21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 TBC1D7Q9P0N9 293 aa21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 WRAP73Q9P2S5 460 aaPredicted RBP21.48■■□□□ 1.03
TM9SF1-203ENST00000524835 MFAP3LO75121 409 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 ITGB3BPQ13352 177 aaPredicted RBP21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 BAATQ14032 418 aaPredicted RBP21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 LRRC55Q6ZSA7 311 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 NYAP1Q6ZVC0 841 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 MB21D1Q8N884 522 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 CNKSR2Q8WXI2 1034 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 PANX2Q96RD6 677 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 TEX13BQ9BXU2 312 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 CSADQ9Y600 493 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 LOC285556D6RIA3 1793 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 A0A1W2PQC6 194 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 ARHGAP6O43182 974 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 STX10O60499 249 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 MTMR1Q13613 665 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 PIGOQ8TEQ8 1089 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 SCFD1Q8WVM8 642 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 TRMT1Q9NXH9 659 aaKnown RBP21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 HOXC10Q9NYD6 342 aa21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.47■■□□□ 1.03
TM9SF1-203ENST00000524835 FXR1P51114 621 aaKnown RBP eCLIP21.46■■□□□ 1.03
TM9SF1-203ENST00000524835 TERF1P54274 439 aa21.46■■□□□ 1.03
TM9SF1-203ENST00000524835 USP50Q70EL3 339 aaPredicted RBP21.46■■□□□ 1.03
TM9SF1-203ENST00000524835 PKD2L1Q9P0L9 805 aa21.46■■□□□ 1.03
TM9SF1-203ENST00000524835 B4DLN1 442 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 NKRFO15226 690 aaKnown RBP eCLIP21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 CASP14P31944 242 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 MIIPQ5JXC2 388 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 RINT1Q6NUQ1 792 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 DPY19L2Q6NUT2 758 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 NEK9Q8TD19 979 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 TSG101Q99816 390 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 DDX39AO00148 427 aaKnown RBP21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 ZBTB39O15060 712 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 PRKCSHP14314 528 aaPredicted RBP21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 IREB2P48200 963 aaKnown RBP21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 DNM2P50570 870 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 TRIM14Q14142 442 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 TREML2Q5T2D2 321 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 ARHGEF16Q5VV41 709 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 SFR1Q86XK3 245 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 CPLX3Q8WVH0 158 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 PPP1R13BQ96KQ4 1090 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 LXNQ9BS40 222 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 ZHX3Q9H4I2 956 aa21.45■■□□□ 1.02
TM9SF1-203ENST00000524835 A0A0G2JMZ2 1700 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 RSPH10B2B2RC85 870 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 RSPH10BP0C881 870 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 MYCLP12524 364 aaPredicted RBP21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 EPHX2P34913 555 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 MTIF2P46199 727 aaKnown RBP21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 CASP5P51878 434 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 XRRA1Q6P2D8 792 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 C1orf186Q6ZWK4 172 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 CNGA4Q8IV77 575 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 ZC3H15Q8WU90 426 aaKnown RBP21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 CDCA5Q96FF9 252 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 NACC1Q96RE7 527 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 KCTD10Q9H3F6 313 aa21.44■■□□□ 1.02
TM9SF1-203ENST00000524835 FGFR1OPO95684 399 aaKnown RBP21.43■■□□□ 1.02
TM9SF1-203ENST00000524835 TNNT1P13805 278 aa21.43■■□□□ 1.02
TM9SF1-203ENST00000524835 FECHP22830 423 aa21.43■■□□□ 1.02
TM9SF1-203ENST00000524835 EPM2AIP1Q7L775 607 aaPredicted RBP21.43■■□□□ 1.02
TM9SF1-203ENST00000524835 CCDC51Q96ER9 411 aa21.43■■□□□ 1.02
TM9SF1-203ENST00000524835 ACAD9Q9H845 621 aa21.43■■□□□ 1.02
TM9SF1-203ENST00000524835 CYP39A1Q9NYL5 469 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms