RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 PTGS1P23219 599 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 CDC25BP30305 580 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 ZNF165P49910 485 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 NAPAP54920 295 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 USH1GQ495M9 461 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 GJC2Q5T442 439 aaPredicted RBP7.99□□□□□ -1.13
VPS11-201ENST00000524454 BTNL9Q6UXG8 535 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 NSMFQ6X4W1 530 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 KRBA2Q6ZNG9 492 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 ABRAQ8N0Z2 381 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 REXO1Q8N1G1 1221 aaKnown RBP7.99□□□□□ -1.13
VPS11-201ENST00000524454 SPATA20Q8TB22 786 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 DPF3Q92784 378 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 TINF2Q9BSI4 451 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 CUEDC2Q9H467 287 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 ACAD9Q9H845 621 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 VAT1LQ9HCJ6 419 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 A1CFQ9NQ94 594 aaKnown RBP7.99□□□□□ -1.13
VPS11-201ENST00000524454 CCDC39Q9UFE4 941 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 DDX20Q9UHI6 824 aaKnown RBP7.99□□□□□ -1.13
VPS11-201ENST00000524454 DACH1Q9UI36 760 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 PNMA2Q9UL42 364 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 OGDHLQ9ULD0 1010 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 PCDHB6Q9Y5E3 794 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 ADGRG1Q9Y653 693 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 ASTN1O14525 1302 aa7.99□□□□□ -1.13
VPS11-201ENST00000524454 DNAJC25-GNG10A0A024R161 153 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 SOWAHBA6NEL2 793 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 H0YGN5 161 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 SNAI1O95863 264 aaPredicted RBP7.98□□□□□ -1.13
VPS11-201ENST00000524454 ICAM1P05362 532 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 SLFN14P0C7P3 912 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 COPB2P35606 906 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 TXLNAP40222 546 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 OAZ1P54368 228 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 MMRN1Q13201 1228 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 NONOQ15233 471 aaKnown RBP eCLIP7.98□□□□□ -1.13
VPS11-201ENST00000524454 CDC37Q16543 378 aaPredicted RBP7.98□□□□□ -1.13
VPS11-201ENST00000524454 CAMK4Q16566 473 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 SLC35G1Q2M3R5 365 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 ANO6Q4KMQ2 910 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 MOXD1Q6UVY6 613 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 SLC30A10Q6XR72 485 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 HEATR3Q7Z4Q2 680 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 PACS2Q86VP3 889 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 ADGRF4Q8IZF3 695 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 CHST13Q8NET6 341 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 PIBF1Q8WXW3 757 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 TATDN2Q93075 761 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 MAF1Q9H063 256 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 C11orf49Q9H6J7 331 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 RIC8AQ9NPQ8 531 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 SLC5A4Q9NY91 659 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 ZHX1Q9UKY1 873 aaPredicted RBP7.98□□□□□ -1.13
VPS11-201ENST00000524454 PFASO15067 1338 aa7.98□□□□□ -1.13
VPS11-201ENST00000524454 SMTNL1A8MU46 457 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 GOLGA6L6A8MZA4 724 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 GOLGA6L19H0YKK7 550 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 ADCY6O43306 1168 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 SMC2O95347 1197 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 PGK1P00558 417 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 MARCKSP29966 332 aaPredicted RBP7.97□□□□□ -1.13
VPS11-201ENST00000524454 CLK2P49760 499 aaKnown RBP7.97□□□□□ -1.13
VPS11-201ENST00000524454 ADCY7P51828 1080 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 MRPL12P52815 198 aaKnown RBP7.97□□□□□ -1.13
VPS11-201ENST00000524454 NLRP12P59046 1061 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 TPM4P67936 248 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 AP3B2Q13367 1082 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 BAATQ14032 418 aaPredicted RBP7.97□□□□□ -1.13
VPS11-201ENST00000524454 IQCB1Q15051 598 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 QRICH1Q2TAL8 776 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 PPP4R3AQ6IN85 833 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 PIK3AP1Q6ZUJ8 805 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 NUDT18Q6ZVK8 323 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 EEPD1Q7L9B9 569 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 NECAB2Q7Z6G3 386 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 NEK8Q86SG6 692 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 CKAP2LQ8IYA6 745 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 C7orf61Q8IZ16 206 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 KCTD17Q8N5Z5 321 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 C4orf32Q8N8J7 132 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 IQUBQ8NA54 791 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 MLKLQ8NB16 471 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 CNNM3Q8NE01 707 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 CLEC4DQ8WXI8 215 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 TBC1D5Q92609 795 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 CUL5Q93034 780 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 MRFAP1L1Q96HT8 127 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 GSDMAQ96QA5 445 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 JMJD4Q9H9V9 463 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 CBX8Q9HC52 389 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.97□□□□□ -1.13
VPS11-201ENST00000524454 CYP39A1Q9NYL5 469 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 FBXO40Q9UH90 709 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 PCDHA6Q9UN73 950 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 PCDHA8Q9Y5H6 950 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 PDE4DIPQ5VU43 2346 aa7.97□□□□□ -1.13
VPS11-201ENST00000524454 BAZ2BQ9UIF8 2168 aaKnown RBP7.97□□□□□ -1.13
VPS11-201ENST00000524454 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.96□□□□□ -1.14
VPS11-201ENST00000524454 MYADML2A6NDP7 307 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms