RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	RCC1L	Q96I51	464 aa	Known RBP	6.07	□□□□□ -1.44
PCM1-223	ENST00000524356	AJUBA	Q96IF1	538 aa		6.07	□□□□□ -1.44
PCM1-223	ENST00000524356	PPM1B	O75688	479 aa		6.06	□□□□□ -1.44
PCM1-223	ENST00000524356	RAD17	O75943	681 aa		6.06	□□□□□ -1.44
PCM1-223	ENST00000524356	KRT4	P19013	534 aa		6.06	□□□□□ -1.44
PCM1-223	ENST00000524356	FBL	P22087	321 aa	Known RBP	6.06	□□□□□ -1.44
PCM1-223	ENST00000524356	ERCC5	P28715	1186 aa	Predicted RBP	6.06	□□□□□ -1.44
PCM1-223	ENST00000524356	SCRN1	Q12765	414 aa		6.06	□□□□□ -1.44
PCM1-223	ENST00000524356		Q6ZPA2	131 aa		6.06	□□□□□ -1.44
PCM1-223	ENST00000524356	ZNF483	Q8TF39	744 aa	Predicted RBP	6.06	□□□□□ -1.44
PCM1-223	ENST00000524356	FERD3L	Q96RJ6	166 aa		6.06	□□□□□ -1.44
PCM1-223	ENST00000524356	PTPN22	Q9Y2R2	807 aa		6.06	□□□□□ -1.44
PCM1-223	ENST00000524356	SYNJ2	O15056	1496 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	ACRV1	P26436	265 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	KRTAP10-11	P60412	298 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	CCDC142	Q17RM4	750 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	GNPTAB	Q3T906	1256 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	MAMDC4	Q6UXC1	1216 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	CEP68	Q76N32	757 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	GLCCI1	Q86VQ1	547 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	PROSER1	Q86XN7	944 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	CERS3	Q8IU89	383 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	RBBP8NL	Q8NC74	664 aa	Predicted RBP	6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	PCDHB4	Q9Y5E5	795 aa		6.05	□□□□□ -1.44
PCM1-223	ENST00000524356	GRIN2B	Q13224	1484 aa		6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	FGD5	Q6ZNL6	1462 aa		6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	KNG1	P01042	644 aa		6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	MAK	P20794	623 aa		6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	HDLBP	Q00341	1268 aa	Known RBP	6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	HS2ST1	Q7LGA3	356 aa		6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	IFNL2	Q8IZJ0	200 aa		6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	ZNF513	Q8N8E2	541 aa	Predicted RBP	6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	TRMT2B	Q96GJ1	504 aa	Known RBP	6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	PCDHB10	Q9UN67	800 aa		6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	SLC30A1	Q9Y6M5	507 aa		6.04	□□□□□ -1.44
PCM1-223	ENST00000524356	MAGI1	Q96QZ7	1491 aa	Predicted RBP	6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	SYNJ1	O43426	1573 aa		6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	HGS	O14964	777 aa	Predicted RBP	6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	TADA3	O75528	432 aa		6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	RPL11	P62913	178 aa	Known RBP	6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	CYP4F3	Q08477	520 aa		6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	POLN	Q7Z5Q5	900 aa		6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	KIAA0825	Q8IV33	1275 aa		6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	KATNBL1	Q9H079	304 aa		6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	FBXL7	Q9UJT9	491 aa		6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	PPT2	Q9UMR5	302 aa		6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	TIMM13	Q9Y5L4	95 aa	Predicted RBP	6.03	□□□□□ -1.44
PCM1-223	ENST00000524356	ARID4B	Q4LE39	1312 aa	Predicted RBP	6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	RAMP2	O60895	175 aa		6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	BCL6	P41182	706 aa		6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	SMAD2	Q15796	467 aa	Known RBP	6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	FBXW10	Q5XX13	1052 aa		6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	STEAP3	Q658P3	488 aa		6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	DTX3	Q8N9I9	347 aa		6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	FRS2	Q8WU20	508 aa		6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	DNAJC2	Q99543	621 aa	Known RBP	6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	SPON2	Q9BUD6	331 aa		6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	BACH2	Q9BYV9	841 aa		6.02	□□□□□ -1.45
PCM1-223	ENST00000524356	CUX1	P39880	1505 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	ZNF888	P0CJ79	500 aa	Predicted RBP	6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	BMP5	P22003	454 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	DUSP8	Q13202	625 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	MRPL58	Q14197	206 aa	Known RBP	6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	EMC4	Q5J8M3	183 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	LDLRAD1	Q5T700	205 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	ZNF808	Q8N4W9	903 aa	Predicted RBP	6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	NPLOC4	Q8TAT6	608 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	KLHL6	Q8WZ60	621 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	CLIP3	Q96DZ5	547 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	PRRX2	Q99811	253 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	TINF2	Q9BSI4	451 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	HSPBP1	Q9NZL4	362 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	APEX2	Q9UBZ4	518 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	SUGT1	Q9Y2Z0	365 aa		6.01	□□□□□ -1.45
PCM1-223	ENST00000524356	KIF13A	Q9H1H9	1805 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	ARNTL	O00327	626 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	MARCH6	O60337	910 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	KCNH1	O95259	989 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	CHGB	P05060	677 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	RAC3	P60763	192 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	CHRNA2	Q15822	529 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	NOL8	Q76FK4	1167 aa	Known RBP	6	□□□□□ -1.45
PCM1-223	ENST00000524356	CCDC103	Q8IW40	242 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	FAM9A	Q8IZU1	332 aa	Predicted RBP	6	□□□□□ -1.45
PCM1-223	ENST00000524356	MICAL1	Q8TDZ2	1067 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	FAM89A	Q96GI7	184 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	TANGO6	Q9C0B7	1094 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	OAZ3	Q9UMX2	235 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	ABCC10	Q5T3U5	1492 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	CEP170	Q5SW79	1584 aa		6	□□□□□ -1.45
PCM1-223	ENST00000524356	PRG4	Q92954	1404 aa	Predicted RBP	5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	SCAMP3	O14828	347 aa	Known RBP	5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	CR2	P20023	1033 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	SLC7A5	Q01650	507 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	RNF151	Q2KHN1	245 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	NOP9	Q86U38	636 aa	Known RBP	5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	REXO1L1P	Q8IX06	675 aa		5.99	□□□□□ -1.45
PCM1-223	ENST00000524356	ULK2	Q8IYT8	1036 aa		5.99	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms