RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 SLC37A4O43826 429 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 KRT2P35908 639 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 TCF7P36402 384 aaPredicted RBP13.58□□□□□ -0.24
CLN8-207ENST00000524258 FOSBP53539 338 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 ACTR2P61160 394 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 SETQ01105 290 aaPredicted RBP13.58□□□□□ -0.24
CLN8-207ENST00000524258 PPP4R3AQ6IN85 833 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 PIK3AP1Q6ZUJ8 805 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 DIS3L2Q8IYB7 885 aaKnown RBP13.58□□□□□ -0.24
CLN8-207ENST00000524258 DHX38Q92620 1227 aaKnown RBP13.58□□□□□ -0.24
CLN8-207ENST00000524258 GJA10Q969M2 543 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 NOC4LQ9BVI4 516 aaKnown RBP13.58□□□□□ -0.24
CLN8-207ENST00000524258 RNPEPQ9H4A4 650 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 TUT1Q9H6E5 874 aaKnown RBP13.58□□□□□ -0.24
CLN8-207ENST00000524258 JPH1Q9HDC5 661 aaPredicted RBP13.58□□□□□ -0.24
CLN8-207ENST00000524258 TMEM39AQ9NV64 488 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 GTF2IRD1Q9UHL9 959 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 UMODL1Q5DID0 1318 aa13.58□□□□□ -0.24
CLN8-207ENST00000524258 LTBP2Q14767 1821 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 LAMA2P24043 3122 aaKnown RBP13.57□□□□□ -0.24
CLN8-207ENST00000524258 NOP56O00567 594 aaKnown RBP13.57□□□□□ -0.24
CLN8-207ENST00000524258 PSMD10O75832 226 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 TIMP1P01033 207 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 CYP2C9P11712 490 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 EPHB4P54760 987 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 ZNF200P98182 395 aaPredicted RBP13.57□□□□□ -0.24
CLN8-207ENST00000524258 MDM2Q00987 491 aaPredicted RBP13.57□□□□□ -0.24
CLN8-207ENST00000524258 GUCY1B3Q02153 619 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 SP4Q02446 784 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 TRIM71Q2Q1W2 868 aaKnown RBP13.57□□□□□ -0.24
CLN8-207ENST00000524258 CHRDL2Q6WN34 429 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 NEK8Q86SG6 692 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 HAS1Q92839 578 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 BADQ92934 168 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 WNT8BQ93098 351 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 ZNF577Q9BSK1 485 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 KCNMB3Q9NPA1 279 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 TBC1D22BQ9NU19 505 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 EMSYQ7Z589 1322 aa13.57□□□□□ -0.24
CLN8-207ENST00000524258 CCDC194A0A1B0GVG4 234 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 KIF28PB7ZC32 967 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 TLR3O15455 904 aaKnown RBP13.56□□□□□ -0.24
CLN8-207ENST00000524258 ATP4AP20648 1035 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 RBL2Q08999 1139 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 GPNMBQ14956 572 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 UTP14CQ5TAP6 766 aaKnown RBP13.56□□□□□ -0.24
CLN8-207ENST00000524258 TRAF7Q6Q0C0 670 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 C16orf59Q7L2K0 433 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 C8orf76Q96K31 380 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 RIT2Q99578 217 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 SDF4Q9BRK5 362 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 KATNAL1Q9BW62 490 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 WNT8AQ9H1J5 351 aa13.56□□□□□ -0.24
CLN8-207ENST00000524258 PRDM5Q9NQX1 630 aaPredicted RBP13.56□□□□□ -0.24
CLN8-207ENST00000524258 RBAK-RBAKDNI3L0D1 243 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 SUPT20HL2P0C7V6 817 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 SMIM10L2AP0DMW4 78 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 SMIM10L2BP0DMW5 78 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 U2AF2P26368 475 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLN8-207ENST00000524258 CYP2C18P33260 490 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 LETM2Q2VYF4 491 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 FAM47CQ5HY64 1035 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 MARCH8Q5T0T0 291 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 MFSD5Q6N075 450 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 ZNF746Q6NUN9 644 aaPredicted RBP13.55□□□□□ -0.24
CLN8-207ENST00000524258 PLPPR4Q7Z2D5 763 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 CCDC60Q8IWA6 550 aaPredicted RBP13.55□□□□□ -0.24
CLN8-207ENST00000524258 AFAP1L1Q8TED9 768 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 SNX21Q969T3 373 aa13.55□□□□□ -0.24
CLN8-207ENST00000524258 FOXP1Q9H334 677 aaPredicted RBP13.55□□□□□ -0.24
CLN8-207ENST00000524258 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
CLN8-207ENST00000524258 RAG1P15918 1043 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 GCFC2P16383 781 aaKnown RBP13.54□□□□□ -0.24
CLN8-207ENST00000524258 GJB2P29033 226 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 PLCB4Q15147 1175 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 PTGISQ16647 500 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 SERINC5Q86VE9 423 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 C7orf31Q8N865 590 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 UNC45AQ9H3U1 944 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 HIPK3Q9H422 1215 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 SMARCAD1Q9H4L7 1026 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 SETD4Q9NVD3 440 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 DDX25Q9UHL0 483 aaKnown RBP13.54□□□□□ -0.24
CLN8-207ENST00000524258 VAV3Q9UKW4 847 aa13.54□□□□□ -0.24
CLN8-207ENST00000524258 MAFBQ9Y5Q3 323 aaPredicted RBP13.54□□□□□ -0.24
CLN8-207ENST00000524258 MBLAC1A4D2B0 266 aaPredicted RBP13.53□□□□□ -0.24
CLN8-207ENST00000524258 ZBTB42B2RXF5 422 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 TREHO43280 583 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 ZNF862O60290 1169 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 STBD1O95210 358 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 TOB1P50616 345 aaPredicted RBP13.53□□□□□ -0.24
CLN8-207ENST00000524258 STAT5BP51692 787 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 KRT76Q01546 638 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 PTK7Q13308 1070 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 TRIM29Q14134 588 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 HABP4Q5JVS0 413 aaKnown RBP13.53□□□□□ -0.24
CLN8-207ENST00000524258 FAM184AQ8NB25 1140 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 LMBR1Q8WVP7 490 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms