RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ALG1Q9BT22 464 aa23.76■■□□□ 1.39
TRAPPC9-215ENST00000524162 SMARCAD1Q9H4L7 1026 aa23.76■■□□□ 1.39
TRAPPC9-215ENST00000524162 UPF2Q9HAU5 1272 aaKnown RBP23.76■■□□□ 1.39
TRAPPC9-215ENST00000524162 TBC1D22BQ9NU19 505 aa23.76■■□□□ 1.39
TRAPPC9-215ENST00000524162 PCDH10Q9P2E7 1040 aa23.76■■□□□ 1.39
TRAPPC9-215ENST00000524162 SORBS3O60504 671 aa23.75■■□□□ 1.39
TRAPPC9-215ENST00000524162 TMEM240Q5SV17 173 aa23.75■■□□□ 1.39
TRAPPC9-215ENST00000524162 SERINC5Q86VE9 423 aa23.75■■□□□ 1.39
TRAPPC9-215ENST00000524162 RETREG2Q8NC44 543 aa23.75■■□□□ 1.39
TRAPPC9-215ENST00000524162 ZSCAN31Q96LW9 406 aaPredicted RBP23.75■■□□□ 1.39
TRAPPC9-215ENST00000524162 ERAP1Q9NZ08 941 aa23.75■■□□□ 1.39
TRAPPC9-215ENST00000524162 ORC3Q9UBD5 711 aaPredicted RBP23.75■■□□□ 1.39
TRAPPC9-215ENST00000524162 SCN5AQ14524 2016 aa23.75■■□□□ 1.39
TRAPPC9-215ENST00000524162 UMODL1Q5DID0 1318 aa23.75■■□□□ 1.39
TRAPPC9-215ENST00000524162 TET1Q8NFU7 2136 aa23.75■■□□□ 1.39
TRAPPC9-215ENST00000524162 CYP3A7-CYP3A51PA0A087WV96 503 aa23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 IPO5O00410 1097 aaKnown RBP23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 DHX15O43143 795 aaKnown RBP23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 CAND2O75155 1236 aa23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 IQCF3P0C7M6 154 aa23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 CYP3A7P24462 503 aa23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 SLC26A2P50443 739 aa23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 SMAD3P84022 425 aaKnown RBP23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 ITGB3BPQ13352 177 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 KRT25Q7Z3Z0 450 aa23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 NSUN7Q8NE18 718 aaKnown RBP23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 RASGRP4Q8TDF6 673 aa23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 TNPO1Q92973 898 aaKnown RBP23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 AIFM3Q96NN9 605 aa23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 LLPHQ9BRT6 129 aaKnown RBP23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 SH2B1Q9NRF2 756 aaPredicted RBP23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 NRCAMQ92823 1304 aa23.74■■□□□ 1.39
TRAPPC9-215ENST00000524162 IGKV6D-21A0A0A0MT36 114 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 C17orf102A2RUQ5 167 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 SOX1O00570 391 aaPredicted RBP23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 LARGE1O95461 756 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 SMIM10L2AP0DMW4 78 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 SMIM10L2BP0DMW5 78 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 FDPSP14324 419 aaKnown RBP23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 ACTR2P61160 394 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 ADAM17P78536 824 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 RABEP1Q15276 862 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 PLPPR4Q7Z2D5 763 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 HERVK_113Q902F9 699 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 LENG9Q96B70 501 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 RNPC3Q96LT9 517 aaKnown RBP23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 MTIF3Q9H2K0 278 aaKnown RBP23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 RNPEPQ9H4A4 650 aa23.73■■□□□ 1.39
TRAPPC9-215ENST00000524162 EDIL3O43854 480 aa23.72■■□□□ 1.39
TRAPPC9-215ENST00000524162 CCL23P55773 120 aa23.72■■□□□ 1.39
TRAPPC9-215ENST00000524162 CHMP4BP1P59074 171 aa23.72■■□□□ 1.39
TRAPPC9-215ENST00000524162 TRIM71Q2Q1W2 868 aaKnown RBP23.72■■□□□ 1.39
TRAPPC9-215ENST00000524162 FAM109BQ6ICB4 259 aaPredicted RBP23.72■■□□□ 1.39
TRAPPC9-215ENST00000524162 NECAB1Q8N987 351 aa23.72■■□□□ 1.39
TRAPPC9-215ENST00000524162 MBOAT7Q96N66 472 aa23.72■■□□□ 1.39
TRAPPC9-215ENST00000524162 TELO2Q9Y4R8 837 aa23.72■■□□□ 1.39
TRAPPC9-215ENST00000524162 FGBP02675 491 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 RPLP2P05387 115 aaKnown RBP23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 SELPP16109 830 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 SP4Q02446 784 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 NONOQ15233 471 aaKnown RBP eCLIP23.71■■□□□ 1.396e-6■■■■□ 21
TRAPPC9-215ENST00000524162 Q4G0T1 1027 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 UTP14CQ5TAP6 766 aaKnown RBP23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 ZNF746Q6NUN9 644 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 ZNF365Q70YC5 407 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 RPAINQ86UA6 219 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 TRIM50Q86XT4 487 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 SMAP1Q8IYB5 467 aaPredicted RBP23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 TBCKQ8TEA7 893 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 DHX38Q92620 1227 aaKnown RBP23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 VWCEQ96DN2 955 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 RIT2Q99578 217 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 ZNF577Q9BSK1 485 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 AZI2Q9H6S1 392 aa23.71■■□□□ 1.39
TRAPPC9-215ENST00000524162 CKBP12277 381 aa23.7■■□□□ 1.38
TRAPPC9-215ENST00000524162 KRT76Q01546 638 aa23.7■■□□□ 1.38
TRAPPC9-215ENST00000524162 HIC1Q14526 733 aa23.7■■□□□ 1.38
TRAPPC9-215ENST00000524162 PRR16Q569H4 304 aa23.7■■□□□ 1.38
TRAPPC9-215ENST00000524162 ABHD15Q6UXT9 468 aa23.7■■□□□ 1.38
TRAPPC9-215ENST00000524162 PPP1R13LQ8WUF5 828 aa23.7■■□□□ 1.38
TRAPPC9-215ENST00000524162 GLG1Q92896 1179 aa23.7■■□□□ 1.38
TRAPPC9-215ENST00000524162 ATP6V0A1Q93050 837 aa23.7■■□□□ 1.38
TRAPPC9-215ENST00000524162 PCYT2Q99447 389 aa23.7■■□□□ 1.38
TRAPPC9-215ENST00000524162 PKD2L1Q9P0L9 805 aa23.7■■□□□ 1.38
TRAPPC9-215ENST00000524162 LRRC8DQ7L1W4 858 aa23.69■■□□□ 1.38
TRAPPC9-215ENST00000524162 LRCH3Q96II8 777 aa23.69■■□□□ 1.38
TRAPPC9-215ENST00000524162 NAP1L4Q99733 375 aaKnown RBP23.69■■□□□ 1.38
TRAPPC9-215ENST00000524162 KCNJ14Q9UNX9 436 aa23.69■■□□□ 1.38
TRAPPC9-215ENST00000524162 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC9-215ENST00000524162 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.68■■□□□ 1.38
TRAPPC9-215ENST00000524162 RRN3P2A6NIE6 340 aa23.68■■□□□ 1.38
TRAPPC9-215ENST00000524162 CCNE2O96020 404 aa23.68■■□□□ 1.38
TRAPPC9-215ENST00000524162 CXCL10P02778 98 aa23.68■■□□□ 1.38
TRAPPC9-215ENST00000524162 GCFC2P16383 781 aaKnown RBP23.68■■□□□ 1.38
TRAPPC9-215ENST00000524162 STAT5BP51692 787 aa23.68■■□□□ 1.38
TRAPPC9-215ENST00000524162 ST3GAL1Q11201 340 aa23.68■■□□□ 1.38
TRAPPC9-215ENST00000524162 PPP4R3AQ6IN85 833 aa23.68■■□□□ 1.38
TRAPPC9-215ENST00000524162 TAF2Q6P1X5 1199 aa23.68■■□□□ 1.38
TRAPPC9-215ENST00000524162 SCLYQ96I15 445 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms