RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 EDIL3O43854 480 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 GAS7O60861 476 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 ATG7O95352 703 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 BAG4O95429 457 aaKnown RBP18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 ZNF286BP0CG31 522 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 GNAT1P11488 350 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 TRAPPC10P48553 1259 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 SLC26A2P50443 739 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 ACTR2P61160 394 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 ORC2Q13416 577 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 KIAA0753Q2KHM9 967 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 FAM47CQ5HY64 1035 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 MIS18BP1Q6P0N0 1132 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 SLFN12Q8IYM2 578 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 SLC5A5Q92911 643 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 TEKT3Q9BXF9 490 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 BCAS3Q9H6U6 928 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 TMEM39AQ9NV64 488 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 ERAP1Q9NZ08 941 aa18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 NOL7Q9UMY1 257 aaKnown RBP18.29■□□□□ 0.52
TRAPPC9-214ENST00000523777 KAT6AQ92794 2004 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 GSTTP1A0A1W2PQM5 241 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 DHX15O43143 795 aaKnown RBP18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 MARCH6O60337 910 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 LGR5O75473 907 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 TDP2O95551 362 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 CD4P01730 458 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 PDIA4P13667 645 aaKnown RBP18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 U2AF2P26368 475 aaKnown RBP eCLIP18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 SFNP31947 248 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 FAAP100Q0VG06 881 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 UTP14CQ5TAP6 766 aaKnown RBP18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 LRCH2Q5VUJ6 765 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 FAM160B1Q5W0V3 765 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 LARP1BQ659C4 914 aaKnown RBP18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 PLPPR4Q7Z2D5 763 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 NOSTRINQ8IVI9 506 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 RDM1Q8NG50 284 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 GLG1Q92896 1179 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 LBHD1Q9BQE6 289 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 PDLIM7Q9NR12 457 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 NOD1Q9Y239 953 aa18.28■□□□□ 0.52
TRAPPC9-214ENST00000523777 WDR64B1ANS9 1081 aa18.27■□□□□ 0.52
TRAPPC9-214ENST00000523777 H0YGN5 161 aa18.27■□□□□ 0.52
TRAPPC9-214ENST00000523777 KIAA0355O15063 1070 aa18.27■□□□□ 0.52
TRAPPC9-214ENST00000523777 JAK3P52333 1124 aa18.27■□□□□ 0.52
TRAPPC9-214ENST00000523777 CHMP4BP1P59074 171 aa18.27■□□□□ 0.52
TRAPPC9-214ENST00000523777 PRDM5Q9NQX1 630 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC9-214ENST00000523777 GTF2IRD1Q9UHL9 959 aa18.27■□□□□ 0.52
TRAPPC9-214ENST00000523777 PCDHA10Q9Y5I2 948 aa18.27■□□□□ 0.52
TRAPPC9-214ENST00000523777 DNAH12Q6ZR08 3092 aa18.27■□□□□ 0.52
TRAPPC9-214ENST00000523777 DDX39AO00148 427 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 B4GALT4O60513 344 aa18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 PSAPP07602 524 aa18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 HSP90AA1P07900 732 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 STAT5BP51692 787 aa18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 EARS2Q5JPH6 523 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 ABHD15Q6UXT9 468 aa18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 CCDC155Q8N6L0 562 aa18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 ETNPPLQ8TBG4 499 aa18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 KCNMB3Q9NPA1 279 aa18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 MYH9P35579 1960 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-214ENST00000523777 IGKV6D-21A0A0A0MT36 114 aa18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 BACH1O14867 736 aa18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 NEMFO60524 1076 aa18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 PSMD10O75832 226 aa18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 RAG1P15918 1043 aa18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 MCTP1Q6DN14 999 aa18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 AFAP1L1Q8TED9 768 aa18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 HDAC6Q9UBN7 1215 aa18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 TBX21Q9UL17 535 aa18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 ZMYND8Q9ULU4 1186 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 SAMM50Q9Y512 469 aa18.25■□□□□ 0.51
TRAPPC9-214ENST00000523777 NRCAMQ92823 1304 aa18.24■□□□□ 0.51
TRAPPC9-214ENST00000523777 C17orf102A2RUQ5 167 aa18.24■□□□□ 0.51
TRAPPC9-214ENST00000523777 SLC37A4O43826 429 aa18.24■□□□□ 0.51
TRAPPC9-214ENST00000523777 CCNE2O96020 404 aa18.24■□□□□ 0.51
TRAPPC9-214ENST00000523777 TIMP1P01033 207 aa18.24■□□□□ 0.51
TRAPPC9-214ENST00000523777 BFSP2Q13515 415 aa18.24■□□□□ 0.51
TRAPPC9-214ENST00000523777 PTGISQ16647 500 aa18.24■□□□□ 0.51
TRAPPC9-214ENST00000523777 ZNF302Q9NR11 478 aa18.24■□□□□ 0.51
TRAPPC9-214ENST00000523777 DISC1Q9NRI5 854 aa18.24■□□□□ 0.51
TRAPPC9-214ENST00000523777 FAM205CA6NFA0 338 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 RRN3P2A6NIE6 340 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 DKC1O60832 514 aaKnown RBP eCLIP18.23■□□□□ 0.515e-7■■■■■ 30.8
TRAPPC9-214ENST00000523777 RPLP2P05387 115 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 SMIM10L2AP0DMW4 78 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 SMIM10L2BP0DMW5 78 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 SYN1P17600 705 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 PPP2R5CQ13362 524 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 CALCRLQ16602 461 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 RILPL1Q5EBL4 403 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 MIER3Q7Z3K6 550 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 TRIM50Q86XT4 487 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 CAGE1Q8TC20 777 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 TRPV6Q9H1D0 765 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 HIPK3Q9H422 1215 aa18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 TRMT13Q9NUP7 481 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-214ENST00000523777 TRIM43BA6NCK2 446 aa18.22■□□□□ 0.51
TRAPPC9-214ENST00000523777 PITPNM1O00562 1244 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms