RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 SDF4Q9BRK5 362 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 C22orf23Q9BZE7 217 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 UPF3BQ9BZI7 483 aaKnown RBP19.67■□□□□ 0.74
CCNC-213ENST00000523541 RNPEPQ9H4A4 650 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 SMARCAD1Q9H4L7 1026 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 ERAP1Q9NZ08 941 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 NRCAMQ92823 1304 aa19.67■□□□□ 0.74
CCNC-213ENST00000523541 COL6A3P12111 3177 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 CDKL5O76039 1030 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 DEXIO95424 95 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 SMIM10L2AP0DMW4 78 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 SMIM10L2BP0DMW5 78 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 ATP2A2P16615 1042 aaKnown RBP19.66■□□□□ 0.74
CCNC-213ENST00000523541 TCF7P36402 384 aaPredicted RBP19.66■□□□□ 0.74
CCNC-213ENST00000523541 GALNT17Q6IS24 598 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 LRRC8DQ7L1W4 858 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 MAFAQ8NHW3 353 aaPredicted RBP19.66■□□□□ 0.74
CCNC-213ENST00000523541 ATP6V0A1Q93050 837 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 NKX2-4Q9H2Z4 354 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 SLC28A3Q9HAS3 691 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 JPH1Q9HDC5 661 aaPredicted RBP19.66■□□□□ 0.74
CCNC-213ENST00000523541 PKD2L1Q9P0L9 805 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 SLC9A2Q9UBY0 812 aa19.66■□□□□ 0.74
CCNC-213ENST00000523541 GSTTP1A0A1W2PQM5 241 aa19.65■□□□□ 0.74
CCNC-213ENST00000523541 EFCAB14O75071 495 aa19.65■□□□□ 0.74
CCNC-213ENST00000523541 CXCL10P02778 98 aa19.65■□□□□ 0.74
CCNC-213ENST00000523541 RPLP2P05387 115 aaKnown RBP19.65■□□□□ 0.74
CCNC-213ENST00000523541 RABGGTBP53611 331 aa19.65■□□□□ 0.74
CCNC-213ENST00000523541 GRIN2CQ14957 1233 aa19.65■□□□□ 0.74
CCNC-213ENST00000523541 TRIM71Q2Q1W2 868 aaKnown RBP19.65■□□□□ 0.74
CCNC-213ENST00000523541 JAKMIP3Q5VZ66 844 aa19.65■□□□□ 0.74
CCNC-213ENST00000523541 DHX38Q92620 1227 aaKnown RBP19.65■□□□□ 0.74
CCNC-213ENST00000523541 GAS2L1Q99501 681 aaPredicted RBP19.65■□□□□ 0.74
CCNC-213ENST00000523541 NCOA5Q9HCD5 579 aaKnown RBP19.65■□□□□ 0.74
CCNC-213ENST00000523541 AGO4Q9HCK5 861 aaKnown RBP19.65■□□□□ 0.74
CCNC-213ENST00000523541 EMSYQ7Z589 1322 aa19.65■□□□□ 0.74
CCNC-213ENST00000523541 SCN5AQ14524 2016 aa19.64■□□□□ 0.74
CCNC-213ENST00000523541 LGR5O75473 907 aa19.64■□□□□ 0.73
CCNC-213ENST00000523541 KCNJ6P48051 423 aa19.64■□□□□ 0.73
CCNC-213ENST00000523541 SLC26A2P50443 739 aa19.64■□□□□ 0.73
CCNC-213ENST00000523541 USP11P51784 963 aa19.64■□□□□ 0.73
CCNC-213ENST00000523541 ZNF200P98182 395 aaPredicted RBP19.64■□□□□ 0.73
CCNC-213ENST00000523541 SETQ01105 290 aaPredicted RBP19.64■□□□□ 0.73
CCNC-213ENST00000523541 PLPPR4Q7Z2D5 763 aa19.64■□□□□ 0.73
CCNC-213ENST00000523541 CYP2W1Q8TAV3 490 aa19.64■□□□□ 0.73
CCNC-213ENST00000523541 AZI2Q9H6S1 392 aa19.64■□□□□ 0.73
CCNC-213ENST00000523541 TMEM260Q9NX78 707 aa19.64■□□□□ 0.73
CCNC-213ENST00000523541 TANC1Q9C0D5 1861 aa19.64■□□□□ 0.73
CCNC-213ENST00000523541 ATG7O95352 703 aa19.63■□□□□ 0.73
CCNC-213ENST00000523541 ARP10275 920 aa19.63■□□□□ 0.73
CCNC-213ENST00000523541 CIITAP33076 1130 aa19.63■□□□□ 0.73
CCNC-213ENST00000523541 ADAM17P78536 824 aa19.63■□□□□ 0.73
CCNC-213ENST00000523541 PPP2R2DQ66LE6 453 aa19.63■□□□□ 0.73
CCNC-213ENST00000523541 RPAINQ86UA6 219 aa19.63■□□□□ 0.73
CCNC-213ENST00000523541 GLG1Q92896 1179 aa19.63■□□□□ 0.73
CCNC-213ENST00000523541 PGBD1Q96JS3 809 aa19.63■□□□□ 0.73
CCNC-213ENST00000523541 SLC9A7Q96T83 725 aa19.63■□□□□ 0.73
CCNC-213ENST00000523541 SLKQ9H2G2 1235 aaPredicted RBP19.63■□□□□ 0.73
CCNC-213ENST00000523541 TBC1D22BQ9NU19 505 aa19.63■□□□□ 0.73
CCNC-213ENST00000523541 RRN3P2A6NIE6 340 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 PFKFB2O60825 505 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 THPOP40225 353 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 NLRP5P59047 1200 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 HIC1Q14526 733 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 TAF2Q6P1X5 1199 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 CNKSR3Q6P9H4 555 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 PLA2G4DQ86XP0 818 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 TRIM50Q86XT4 487 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 PRDM12Q9H4Q4 367 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 SETD4Q9NVD3 440 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 PCDHA11Q9Y5I1 949 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 DOCK5Q9H7D0 1870 aa19.62■□□□□ 0.73
CCNC-213ENST00000523541 IGLV3-22A0A075B6J6 115 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 ABHD14A-ACY1A0A1B0GW23 586 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 RSPH10B2B2RC85 870 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 KIF28PB7ZC32 967 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 FAM86B1E9PN63 330 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 TREHO43280 583 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 FAM86B2P0C5J1 330 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 RSPH10BP0C881 870 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 XBP1P17861 261 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 ACTR2P61160 394 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 GPNMBQ14956 572 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 ZNF618Q5T7W0 954 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 TRAF7Q6Q0C0 670 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 VPS54Q9P1Q0 977 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 PCDHA4Q9UN74 947 aa19.61■□□□□ 0.73
CCNC-213ENST00000523541 YBX2Q9Y2T7 364 aaKnown RBP19.61■□□□□ 0.73
CCNC-213ENST00000523541 TRIP12Q14669 1992 aaPredicted RBP19.61■□□□□ 0.73
CCNC-213ENST00000523541 IPO5O00410 1097 aaKnown RBP19.6■□□□□ 0.73
CCNC-213ENST00000523541 MYOGP15173 224 aa19.6■□□□□ 0.73
CCNC-213ENST00000523541 IGFBP4P22692 258 aa19.6■□□□□ 0.73
CCNC-213ENST00000523541 STAT5BP51692 787 aa19.6■□□□□ 0.73
CCNC-213ENST00000523541 ITGB3BPQ13352 177 aaPredicted RBP19.6■□□□□ 0.73
CCNC-213ENST00000523541 IKBKEQ14164 716 aa19.6■□□□□ 0.73
CCNC-213ENST00000523541 POTEDQ86YR6 584 aa19.6■□□□□ 0.73
CCNC-213ENST00000523541 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.6■□□□□ 0.73
CCNC-213ENST00000523541 DAGLBQ8NCG7 672 aa19.6■□□□□ 0.73
CCNC-213ENST00000523541 PPM1EQ8WY54 764 aa19.6■□□□□ 0.73
CCNC-213ENST00000523541 ZBED2Q9BTP6 218 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms