RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 CD300LDQ6UXZ3 194 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 AHI1Q8N157 1196 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 PPM1KQ8N3J5 372 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 SMARCC2Q8TAQ2 1214 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 ORAI3Q9BRQ5 295 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 HSPBP1Q9NZL4 362 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 CNOT6Q9ULM6 557 aaKnown RBP8.47□□□□□ -1.05
CPNE3-206ENST00000523469 DCAF1Q9Y4B6 1507 aa8.47□□□□□ -1.05
CPNE3-206ENST00000523469 SLC12A8A0AV02 714 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 CLASP2O75122 1294 aaKnown RBP8.46□□□□□ -1.06
CPNE3-206ENST00000523469 LRG1P02750 347 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 C8AP07357 584 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 MYCLP1P12525 358 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-206ENST00000523469 FAHP16930 419 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 GJA4P35212 333 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 MECP2P51608 486 aaKnown RBP8.46□□□□□ -1.06
CPNE3-206ENST00000523469 GRIN1Q05586 938 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 PAN2Q504Q3 1202 aaKnown RBP8.46□□□□□ -1.06
CPNE3-206ENST00000523469 BTBD8Q5XKL5 378 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 TEPPQ6URK8 271 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 TMEFF1Q8IYR6 380 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 FAM26EQ8N5C1 309 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 CHST14Q8NCH0 376 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 TARS2Q9BW92 718 aaKnown RBP8.46□□□□□ -1.06
CPNE3-206ENST00000523469 KRTAP4-8Q9BYQ9 185 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 CABP5Q9NP86 173 aa8.46□□□□□ -1.06
CPNE3-206ENST00000523469 RIMBP3CA6NJZ7 1639 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 RIMBP3BA6NNM3 1639 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 RIMBP3Q9UFD9 1639 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 A0A087X0B3 334 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 FAM83GA6ND36 823 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 CBX4O00257 560 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 RFXAPO00287 272 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 LIMS1P48059 325 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 SSPNQ14714 243 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 ZNF124Q15973 351 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 KCNA10Q16322 511 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 CR1LQ2VPA4 569 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 OTOP1Q7RTM1 612 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 MTFR1LQ9H019 292 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 TMX1Q9H3N1 280 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 MAPRE3Q9UPY8 281 aa8.45□□□□□ -1.06
CPNE3-206ENST00000523469 GSG1L2A8MUP6 293 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 TRAF5O00463 557 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 KCNK3O14649 394 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 PDE8AO60658 829 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 KPNA6O60684 536 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 PTPN1P18031 435 aaKnown RBP8.44□□□□□ -1.06
CPNE3-206ENST00000523469 PI3P19957 117 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 LINC00310P59036 64 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 ZNF385BQ569K4 471 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 FAM129CQ86XR2 697 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 KIF18BQ86Y91 864 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 NOSTRINQ8IVI9 506 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 BOCQ9BWV1 1114 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 RIC8BQ9NVN3 520 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 B4GALT6Q9UBX8 382 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 PRKAB1Q9Y478 270 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 KCTD3Q9Y597 815 aa8.44□□□□□ -1.06
CPNE3-206ENST00000523469 ZCCHC6Q5VYS8 1495 aaKnown RBP8.44□□□□□ -1.06
CPNE3-206ENST00000523469 FAM90A27PA6NNH2 459 aa8.43□□□□□ -1.06
CPNE3-206ENST00000523469 NPIPB6E9PJ23 425 aa8.43□□□□□ -1.06
CPNE3-206ENST00000523469 MASP1P48740 699 aa8.43□□□□□ -1.06
CPNE3-206ENST00000523469 CNKSR3Q6P9H4 555 aa8.43□□□□□ -1.06
CPNE3-206ENST00000523469 EPB41L4AQ9HCS5 686 aaPredicted RBP8.43□□□□□ -1.06
CPNE3-206ENST00000523469 PTPDC1A2A3K4 754 aa8.42□□□□□ -1.06
CPNE3-206ENST00000523469 ACOT7O00154 380 aa8.42□□□□□ -1.06
CPNE3-206ENST00000523469 HIP1RO75146 1068 aa8.42□□□□□ -1.06
CPNE3-206ENST00000523469 THNSL2Q86YJ6 484 aa8.42□□□□□ -1.06
CPNE3-206ENST00000523469 GORASP1Q9BQQ3 440 aa8.42□□□□□ -1.06
CPNE3-206ENST00000523469 B3GALT1Q9Y5Z6 326 aa8.42□□□□□ -1.06
CPNE3-206ENST00000523469 PMF1-BGLAPU3KQ54 211 aa8.42□□□□□ -1.06
CPNE3-206ENST00000523469 SCDO00767 359 aa8.41□□□□□ -1.06
CPNE3-206ENST00000523469 IRF9Q00978 393 aa8.41□□□□□ -1.06
CPNE3-206ENST00000523469 PCBP1Q15365 356 aaKnown RBP eCLIP8.41□□□□□ -1.06
CPNE3-206ENST00000523469 CPZQ66K79 652 aa8.41□□□□□ -1.06
CPNE3-206ENST00000523469 PKN3Q6P5Z2 889 aa8.41□□□□□ -1.06
CPNE3-206ENST00000523469 TMEM209Q96SK2 561 aa8.41□□□□□ -1.06
CPNE3-206ENST00000523469 KCNH7Q9NS40 1196 aa8.41□□□□□ -1.06
CPNE3-206ENST00000523469 ZKSCAN5Q9Y2L8 839 aa8.41□□□□□ -1.06
CPNE3-206ENST00000523469 SBNO2Q9Y2G9 1366 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 F2P00734 622 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 C4BPAP04003 597 aaKnown RBP8.4□□□□□ -1.06
CPNE3-206ENST00000523469 PLA2G1BP04054 148 aaKnown RBP8.4□□□□□ -1.06
CPNE3-206ENST00000523469 ZBTB48P10074 688 aaPredicted RBP8.4□□□□□ -1.06
CPNE3-206ENST00000523469 ITGA1P56199 1179 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 HTRA3P83110 453 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 CAP1Q01518 475 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 SEC23AQ15436 765 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 PROSER1Q86XN7 944 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 TTLL6Q8N841 843 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 LINC00482Q8N8I6 264 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 DLG3Q92796 817 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 PWWP2AQ96N64 755 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 NOX5Q96PH1 765 aa8.4□□□□□ -1.06
CPNE3-206ENST00000523469 C11orf84Q9BUA3 381 aaPredicted RBP8.4□□□□□ -1.06
CPNE3-206ENST00000523469 NCAPD3P42695 1498 aa8.39□□□□□ -1.07
CPNE3-206ENST00000523469 GAS7O60861 476 aa8.39□□□□□ -1.07
CPNE3-206ENST00000523469 CANXP27824 592 aaKnown RBP8.39□□□□□ -1.07
CPNE3-206ENST00000523469 SOX5P35711 763 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms