RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ZNF215Q9UL58 517 aaPredicted RBP26.27■■□□□ 1.8
PVT1-218ENST00000523328 SUPT16HQ9Y5B9 1047 aaKnown RBP26.27■■□□□ 1.8
PVT1-218ENST00000523328 TTC3P53804 2025 aa26.26■■□□□ 1.79
PVT1-218ENST00000523328 C19orf67A6NJJ6 358 aa26.26■■□□□ 1.79
PVT1-218ENST00000523328 CHRNA1P02708 482 aa26.26■■□□□ 1.79
PVT1-218ENST00000523328 TRDNQ13061 729 aa26.26■■□□□ 1.79
PVT1-218ENST00000523328 UTP14CQ5TAP6 766 aaKnown RBP26.26■■□□□ 1.79
PVT1-218ENST00000523328 FIBCD1Q8N539 461 aa26.26■■□□□ 1.79
PVT1-218ENST00000523328 RC3H2Q9HBD1 1191 aaKnown RBP26.26■■□□□ 1.79
PVT1-218ENST00000523328 FAM50BQ9Y247 325 aa26.26■■□□□ 1.79
PVT1-218ENST00000523328 IFIT3O14879 490 aaKnown RBP26.25■■□□□ 1.79
PVT1-218ENST00000523328 CTNNB1P35222 781 aa26.25■■□□□ 1.79
PVT1-218ENST00000523328 CTC1Q2NKJ3 1217 aa26.25■■□□□ 1.79
PVT1-218ENST00000523328 RPAINQ86UA6 219 aa26.25■■□□□ 1.79
PVT1-218ENST00000523328 UIMC1Q96RL1 719 aa26.25■■□□□ 1.79
PVT1-218ENST00000523328 SENP7Q9BQF6 1050 aa26.25■■□□□ 1.79
PVT1-218ENST00000523328 EHMT1Q9H9B1 1298 aa26.25■■□□□ 1.79
PVT1-218ENST00000523328 NRCAMQ92823 1304 aa26.24■■□□□ 1.79
PVT1-218ENST00000523328 RB1P06400 928 aa26.24■■□□□ 1.79
PVT1-218ENST00000523328 CYP21A2P08686 494 aa26.24■■□□□ 1.79
PVT1-218ENST00000523328 ALYREFQ86V81 257 aaKnown RBP26.24■■□□□ 1.79
PVT1-218ENST00000523328 ADHFE1Q8IWW8 467 aa26.24■■□□□ 1.79
PVT1-218ENST00000523328 ZNF318Q5VUA4 2279 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 ADGRA3Q8IWK6 1321 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 GRM6O15303 877 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 GHRP10912 638 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 BMPR1AP36894 532 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 SP4Q02446 784 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 MGAT3Q09327 533 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 CSPP1Q1MSJ5 1256 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 PCNX4Q63HM2 1172 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 RUFY4Q6ZNE9 571 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 C11orf84Q9BUA3 381 aaPredicted RBP26.23■■□□□ 1.79
PVT1-218ENST00000523328 LMAN2LQ9H0V9 348 aa26.23■■□□□ 1.79
PVT1-218ENST00000523328 ERICH2A1L162 156 aa26.22■■□□□ 1.79
PVT1-218ENST00000523328 NCK2O43639 380 aa26.22■■□□□ 1.79
PVT1-218ENST00000523328 DLX2Q07687 328 aaPredicted RBP26.22■■□□□ 1.79
PVT1-218ENST00000523328 HYAL1Q12794 435 aa26.22■■□□□ 1.79
PVT1-218ENST00000523328 WTAPQ15007 396 aa26.22■■□□□ 1.79
PVT1-218ENST00000523328 USP17L6PQ6QN14 398 aa26.22■■□□□ 1.79
PVT1-218ENST00000523328 PIBF1Q8WXW3 757 aa26.22■■□□□ 1.79
PVT1-218ENST00000523328 CLP1Q92989 425 aaKnown RBP26.22■■□□□ 1.79
PVT1-218ENST00000523328 RWDD3Q9Y3V2 267 aa26.22■■□□□ 1.79
PVT1-218ENST00000523328 TAF6LQ9Y6J9 622 aa26.22■■□□□ 1.79
PVT1-218ENST00000523328 U3KPZ7 1027 aaPredicted RBP26.22■■□□□ 1.79
PVT1-218ENST00000523328 MEIS2O14770 477 aa26.21■■□□□ 1.79
PVT1-218ENST00000523328 LPIN1Q14693 890 aa26.21■■□□□ 1.79
PVT1-218ENST00000523328 TAF2Q6P1X5 1199 aa26.21■■□□□ 1.79
PVT1-218ENST00000523328 XRRA1Q6P2D8 792 aa26.21■■□□□ 1.79
PVT1-218ENST00000523328 ZNF689Q96CS4 500 aaPredicted RBP26.21■■□□□ 1.79
PVT1-218ENST00000523328 WDFY4Q6ZS81 3184 aa26.21■■□□□ 1.79
PVT1-218ENST00000523328 TRIOO75962 3097 aa26.2■■□□□ 1.78
PVT1-218ENST00000523328 PIK3CDO00329 1044 aa26.2■■□□□ 1.78
PVT1-218ENST00000523328 ENPP3O14638 875 aa26.2■■□□□ 1.78
PVT1-218ENST00000523328 IRS1P35568 1242 aa26.2■■□□□ 1.78
PVT1-218ENST00000523328 TCF7P36402 384 aaPredicted RBP26.2■■□□□ 1.78
PVT1-218ENST00000523328 PTH1RQ03431 593 aa26.2■■□□□ 1.78
PVT1-218ENST00000523328 SMAD2Q15796 467 aaKnown RBP26.2■■□□□ 1.78
PVT1-218ENST00000523328 SMARCC2Q8TAQ2 1214 aa26.2■■□□□ 1.78
PVT1-218ENST00000523328 KIAA1671Q9BY89 1806 aa26.2■■□□□ 1.78
PVT1-218ENST00000523328 GIMAP8Q8ND71 665 aaPredicted RBP26.19■■□□□ 1.78
PVT1-218ENST00000523328 LOXHD1Q8IVV2 1947 aa26.19■■□□□ 1.78
PVT1-218ENST00000523328 MBLAC1A4D2B0 266 aaPredicted RBP26.18■■□□□ 1.78
PVT1-218ENST00000523328 E7EWF7 191 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 MBTPS2O43462 519 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 ATP9AO75110 1047 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 GSPT1P15170 499 aaKnown RBP26.18■■□□□ 1.78
PVT1-218ENST00000523328 KCNA2P16389 499 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 ANTXR2P58335 489 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 PPFIA1Q13136 1202 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 SART3Q15020 963 aaKnown RBP26.18■■□□□ 1.78
PVT1-218ENST00000523328 CLUL1Q15846 466 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 FBXO47Q5MNV8 452 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 CATIPQ7Z7H3 387 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 RALYLQ86SE5 291 aaKnown RBP26.18■■□□□ 1.78
PVT1-218ENST00000523328 NLRX1Q86UT6 975 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 NCOA7Q8NI08 942 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 IGDCC4Q8TDY8 1250 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 CUL5Q93034 780 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 SPZ1Q9BXG8 430 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 TUBE1Q9UJT0 475 aa26.18■■□□□ 1.78
PVT1-218ENST00000523328 GSTTP1A0A1W2PQM5 241 aa26.17■■□□□ 1.78
PVT1-218ENST00000523328 TBX10O75333 385 aa26.17■■□□□ 1.78
PVT1-218ENST00000523328 GTF2F1P35269 517 aaKnown RBP eCLIP26.17■■□□□ 1.78
PVT1-218ENST00000523328 CAMK1Q14012 370 aa26.17■■□□□ 1.78
PVT1-218ENST00000523328 GRIK4Q16099 956 aa26.17■■□□□ 1.78
PVT1-218ENST00000523328 MARCH8Q5T0T0 291 aa26.17■■□□□ 1.78
PVT1-218ENST00000523328 DNAJB3Q8WWF6 145 aa26.17■■□□□ 1.78
PVT1-218ENST00000523328 GPRASP2Q96D09 838 aa26.17■■□□□ 1.78
PVT1-218ENST00000523328 FBXL18Q96ME1 805 aa26.17■■□□□ 1.78
PVT1-218ENST00000523328 UPF3BQ9BZI7 483 aaKnown RBP26.17■■□□□ 1.78
PVT1-218ENST00000523328 KCNH6Q9H252 994 aa26.17■■□□□ 1.78
PVT1-218ENST00000523328 DGKIO75912 1065 aa26.16■■□□□ 1.78
PVT1-218ENST00000523328 MMP1P03956 469 aa26.16■■□□□ 1.78
PVT1-218ENST00000523328 MARK3P27448 753 aa26.16■■□□□ 1.78
PVT1-218ENST00000523328 NHLH1Q02575 133 aa26.16■■□□□ 1.78
PVT1-218ENST00000523328 BTG3Q14201 252 aaPredicted RBP26.16■■□□□ 1.78
PVT1-218ENST00000523328 RSPH3Q86UC2 560 aa26.16■■□□□ 1.78
PVT1-218ENST00000523328 LINC01599Q8WXQ3 324 aa26.16■■□□□ 1.78
PVT1-218ENST00000523328 SEPT1Q8WYJ6 367 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms