RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ZNF215Q9UL58 517 aaPredicted RBP17.75■□□□□ 0.43
MRPS28-209ENST00000522987 EVPLQ92817 2033 aa17.74■□□□□ 0.43
MRPS28-209ENST00000522987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.74■□□□□ 0.43
MRPS28-209ENST00000522987 STAM2O75886 525 aa17.74■□□□□ 0.43
MRPS28-209ENST00000522987 GHRP10912 638 aa17.74■□□□□ 0.43
MRPS28-209ENST00000522987 MCM5P33992 734 aa17.74■□□□□ 0.43
MRPS28-209ENST00000522987 TCF7P36402 384 aaPredicted RBP17.74■□□□□ 0.43
MRPS28-209ENST00000522987 MKRN4PQ13434 485 aaPredicted RBP17.74■□□□□ 0.43
MRPS28-209ENST00000522987 NLRX1Q86UT6 975 aa17.74■□□□□ 0.43
MRPS28-209ENST00000522987 KHSRPQ92945 711 aaKnown RBP eCLIP17.74■□□□□ 0.434e-8■■■□□ 15.6
MRPS28-209ENST00000522987 PSTPIP2Q9H939 334 aa17.74■□□□□ 0.43
MRPS28-209ENST00000522987 KCNA5P22460 613 aa17.73■□□□□ 0.43
MRPS28-209ENST00000522987 IGBP1P78318 339 aa17.73■□□□□ 0.43
MRPS28-209ENST00000522987 HTRA4P83105 476 aaPredicted RBP17.73■□□□□ 0.43
MRPS28-209ENST00000522987 CREB3L3Q68CJ9 461 aa17.73■□□□□ 0.43
MRPS28-209ENST00000522987 EP400NLQ6ZTU2 488 aa17.73■□□□□ 0.43
MRPS28-209ENST00000522987 HEATR3Q7Z4Q2 680 aa17.73■□□□□ 0.43
MRPS28-209ENST00000522987 MICU3Q86XE3 530 aa17.73■□□□□ 0.43
MRPS28-209ENST00000522987 PGBD1Q96JS3 809 aa17.73■□□□□ 0.43
MRPS28-209ENST00000522987 TCEANC2Q96MN5 208 aa17.73■□□□□ 0.43
MRPS28-209ENST00000522987 ESYT1Q9BSJ8 1104 aa17.73■□□□□ 0.43
MRPS28-209ENST00000522987 IFIH1Q9BYX4 1025 aaKnown RBP17.73■□□□□ 0.43
MRPS28-209ENST00000522987 UBE2ZQ9H832 354 aaPredicted RBP17.73■□□□□ 0.43
MRPS28-209ENST00000522987 ANO2Q9NQ90 1003 aa17.73■□□□□ 0.43
MRPS28-209ENST00000522987 GSTTP1A0A1W2PQM5 241 aa17.72■□□□□ 0.43
MRPS28-209ENST00000522987 GNAT1P11488 350 aa17.72■□□□□ 0.43
MRPS28-209ENST00000522987 KCNA2P16389 499 aa17.72■□□□□ 0.43
MRPS28-209ENST00000522987 ITGB5P18084 799 aa17.72■□□□□ 0.43
MRPS28-209ENST00000522987 EPC2Q52LR7 807 aa17.72■□□□□ 0.43
MRPS28-209ENST00000522987 MAP3K14Q99558 947 aa17.72■□□□□ 0.43
MRPS28-209ENST00000522987 PIK3CDO00329 1044 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 CHRNA1P02708 482 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 GNAQP50148 359 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 ADAM17P78536 824 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 PPFIA1Q13136 1202 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 GPM6BQ13491 265 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 GLG1Q92896 1179 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 TOP1MTQ969P6 601 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 TMEM87BQ96K49 555 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 SENP7Q9BQF6 1050 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 LZTS2Q9BRK4 669 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 CD320Q9NPF0 282 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 PCDHA6Q9UN73 950 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 PCDHA8Q9Y5H6 950 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 SLC12A7Q9Y666 1083 aa17.71■□□□□ 0.43
MRPS28-209ENST00000522987 MYH9P35579 1960 aaKnown RBP17.7■□□□□ 0.42
MRPS28-209ENST00000522987 FAM86C2PA6NEL3 165 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 SPDYE3A6NKU9 549 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 IBSPP21815 317 aaPredicted RBP17.7■□□□□ 0.42
MRPS28-209ENST00000522987 MTMR1Q13613 665 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 GRIK4Q16099 956 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 TMTC3Q6ZXV5 915 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 SP7Q8TDD2 431 aaPredicted RBP17.7■□□□□ 0.42
MRPS28-209ENST00000522987 DNAJB3Q8WWF6 145 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 GPRASP2Q96D09 838 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 UIMC1Q96RL1 719 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 FAM49AQ9H0Q0 323 aaPredicted RBP17.7■□□□□ 0.42
MRPS28-209ENST00000522987 LMCD1Q9NZU5 365 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 TTC3P53804 2025 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 WDR81Q562E7 1941 aa17.7■□□□□ 0.42
MRPS28-209ENST00000522987 H3BQ06 376 aaPredicted RBP17.69■□□□□ 0.42
MRPS28-209ENST00000522987 IL9P15248 144 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 SMARCA1P28370 1054 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 TMEM62Q0P6H9 643 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 XRRA1Q6P2D8 792 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 TMEM192Q8IY95 271 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 FANCBQ8NB91 859 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 TRAPPC12Q8WVT3 735 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 SEPT1Q8WYJ6 367 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 TUBE1Q9UJT0 475 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 UBIAD1Q9Y5Z9 338 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 NRCAMQ92823 1304 aa17.69■□□□□ 0.42
MRPS28-209ENST00000522987 CAND2O75155 1236 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 CALM1P0DP23 149 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 CALM2P0DP24 149 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 CALM3P0DP25 149 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 CTNNB1P35222 781 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 LPIN1Q14693 890 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 NECTIN1Q15223 517 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 TCEAL5Q5H9L2 206 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 FAM26DQ5JW98 314 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 WWC2Q6AWC2 1192 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 TYW1BQ6NUM6 668 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 TMTC2Q8N394 836 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 GIMAP8Q8ND71 665 aaPredicted RBP17.68■□□□□ 0.42
MRPS28-209ENST00000522987 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.68■□□□□ 0.42
MRPS28-209ENST00000522987 CYP2W1Q8TAV3 490 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 MRPL38Q96DV4 380 aaKnown RBP17.68■□□□□ 0.42
MRPS28-209ENST00000522987 CDY2AQ9Y6F7 541 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 CNTNAP5Q8WYK1 1306 aa17.68■□□□□ 0.42
MRPS28-209ENST00000522987 LIFRP42702 1097 aa17.67■□□□□ 0.42
MRPS28-209ENST00000522987 NAPAP54920 295 aa17.67■□□□□ 0.42
MRPS28-209ENST00000522987 MGAT3Q09327 533 aa17.67■□□□□ 0.42
MRPS28-209ENST00000522987 MARCH8Q5T0T0 291 aa17.67■□□□□ 0.42
MRPS28-209ENST00000522987 APBB2Q92870 758 aa17.67■□□□□ 0.42
MRPS28-209ENST00000522987 PCYT2Q99447 389 aa17.67■□□□□ 0.42
MRPS28-209ENST00000522987 C1QTNF1Q9BXJ1 281 aa17.67■□□□□ 0.42
MRPS28-209ENST00000522987 JADE2Q9NQC1 790 aa17.67■□□□□ 0.42
MRPS28-209ENST00000522987 TMEM260Q9NX78 707 aa17.67■□□□□ 0.42
MRPS28-209ENST00000522987 ERAP1Q9NZ08 941 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms