RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CR1LQ2VPA4 569 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 BORAQ6PGQ7 559 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 TEPPQ6URK8 271 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 OTOP3Q7RTS5 596 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 MAMDC2Q7Z304 686 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-209ENST00000521559 ZNF761Q86XN6 746 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-209ENST00000521559 ZBTB38Q8NAP3 1195 aaPredicted RBP4.79□□□□□ -1.64
VPS13B-209ENST00000521559 ARRDC4Q8NCT1 418 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 TTLL11Q8NHH1 800 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 ADAMTS17Q8TE56 1095 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 JAM3Q9BX67 310 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 CDIP1Q9H305 208 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 HSPBP1Q9NZL4 362 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 ASH2LQ9UBL3 628 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 CNOT11Q9UKZ1 510 aaKnown RBP4.79□□□□□ -1.64
VPS13B-209ENST00000521559 UHRF1BP1LA0JNW5 1464 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 PLB1Q6P1J6 1458 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 FMN1Q68DA7 1419 aa4.79□□□□□ -1.64
VPS13B-209ENST00000521559 SAMD9Q5K651 1589 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 ADAMTS20P59510 1910 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 TRBV23-1A0A0A0MS06 115 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 CCDC85CA6NKD9 419 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 SOD2P04179 222 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 SUMO1P63165 101 aaKnown RBP4.78□□□□□ -1.64
VPS13B-209ENST00000521559 RBL2Q08999 1139 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 NTRK3Q16288 839 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 PRAMEF18Q5VWM3 479 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 KCNT2Q6UVM3 1135 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 SPATC1Q76KD6 591 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 PIP4K2CQ8TBX8 421 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 PTPRN2Q92932 1015 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 LNPKQ9C0E8 428 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 ADAM7Q9H2U9 754 aa4.78□□□□□ -1.64
VPS13B-209ENST00000521559 CTTNBP2Q8WZ74 1663 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 ATP10BO94823 1461 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 PLEKHD1A6NEE1 506 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 MROH6A6NGR9 719 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 C9orf118A6NHY6 69 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 SLC27A2O14975 620 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 GSTA4O15217 222 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 LRG1P02750 347 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 PLP2Q04941 152 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 PAK1Q13153 545 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 RGL3Q3MIN7 710 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 YOD1Q5VVQ6 348 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-209ENST00000521559 EP400NLQ6ZTU2 488 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 STK32CQ86UX6 486 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 LGI4Q8N135 537 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 UHMK1Q8TAS1 419 aaKnown RBP4.77□□□□□ -1.65
VPS13B-209ENST00000521559 LCORQ96JN0 433 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-209ENST00000521559 KCNJ15Q99712 375 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 PDGFDQ9GZP0 370 aaPredicted RBP4.77□□□□□ -1.65
VPS13B-209ENST00000521559 L2HGDHQ9H9P8 463 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 PFDN2Q9UHV9 154 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 DSEQ9UL01 958 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 CASKIN1Q8WXD9 1431 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 ABCA8O94911 1581 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 ABCC2Q92887 1545 aa4.77□□□□□ -1.65
VPS13B-209ENST00000521559 DDX3XO00571 662 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS13B-209ENST00000521559 CYP1A1P04798 512 aaPredicted RBP4.76□□□□□ -1.65
VPS13B-209ENST00000521559 GABREP78334 506 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 ADAM9Q13443 819 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 TUSC3Q13454 348 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 RTP5Q14D33 572 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 SURF1Q15526 300 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 PRR31Q5SQ13 230 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 MCTP2Q6DN12 878 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 VASNQ6EMK4 673 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 PLEKHH3Q7Z736 793 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 MTDHQ86UE4 582 aaKnown RBP4.76□□□□□ -1.65
VPS13B-209ENST00000521559 NLGN4XQ8N0W4 816 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 TXNDC5Q8NBS9 432 aaKnown RBP4.76□□□□□ -1.65
VPS13B-209ENST00000521559 DDX1Q92499 740 aaKnown RBP4.76□□□□□ -1.65
VPS13B-209ENST00000521559 MKL1Q969V6 931 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 DEPDC7Q96QD5 511 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 DHRS4Q9BTZ2 278 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 BDH2Q9BUT1 245 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 TMEM168Q9H0V1 697 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 PPARGC1AQ9UBK2 798 aaKnown RBP4.76□□□□□ -1.65
VPS13B-209ENST00000521559 FTSJ1Q9UET6 329 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 CDK11AQ9UQ88 783 aaPredicted RBP4.76□□□□□ -1.65
VPS13B-209ENST00000521559 KDM5BQ9UGL1 1544 aa4.76□□□□□ -1.65
VPS13B-209ENST00000521559 NUP153P49790 1475 aaKnown RBP4.75□□□□□ -1.65
VPS13B-209ENST00000521559 KDM2BQ8NHM5 1336 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 CCDC163A0A0D9SF12 145 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 BLACEA4D250 179 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 ADCY3O60266 1144 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 CHGBP05060 677 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 FAHP16930 419 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 CNR2P34972 360 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 IL13P35225 146 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 PAN2Q504Q3 1202 aaKnown RBP4.75□□□□□ -1.65
VPS13B-209ENST00000521559 HABP4Q5JVS0 413 aaKnown RBP4.75□□□□□ -1.65
VPS13B-209ENST00000521559 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.75□□□□□ -1.65
VPS13B-209ENST00000521559 BORCS6Q96GS4 357 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 SYT3Q9BQG1 590 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 IPPKQ9H8X2 491 aa4.75□□□□□ -1.65
VPS13B-209ENST00000521559 DLL4Q9NR61 685 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms