RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 TECP42680 631 aa8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 TBC1D8BQ0IIM8 1120 aa8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 PRPF38AQ8NAV1 312 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 ADAM32Q8TC27 787 aa8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 MAP4K1Q92918 833 aa8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 NEUROD6Q96NK8 337 aa8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 BBC3Q96PG8 261 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 SMG5Q9UPR3 1016 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 MRPL42Q9Y6G3 142 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 LCTP09848 1927 aa8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 COL4A3Q01955 1670 aa8.69□□□□□ -1.02
CTNNA1-227ENST00000521387 TENM4Q6N022 2769 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 RSPH10B2B2RC85 870 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 NARSO43776 548 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 GDF9O60383 454 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 LILRB5O75023 590 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 ZBED4O75132 1171 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 ARIH2O95376 493 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 WEE2P0C1S8 567 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 RSPH10BP0C881 870 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 ERVFC1P60507 584 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 SPECC1Q5M775 1068 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 SEPT8Q92599 483 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 KIFC2Q96AC6 838 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 RIOK1Q9BRS2 568 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 EPC1Q9H2F5 836 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 ACAD9Q9H845 621 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 CYP39A1Q9NYL5 469 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 DUSP12Q9UNI6 340 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 WASF3Q9UPY6 502 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 EMSYQ7Z589 1322 aa8.68□□□□□ -1.02
CTNNA1-227ENST00000521387 BHMG1C9JSJ3 638 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 SPTLC1O15269 473 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 LRRN2O75325 713 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 NDUFB10O96000 172 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 MMP3P08254 477 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 OAZ1P54368 228 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 SPEM2Q0P670 501 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 BTG3Q14201 252 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 CCDC6Q16204 474 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 NAALADL2Q58DX5 795 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 MUM1L1Q5H9M0 696 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 SMC5Q8IY18 1101 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 ZBTB44Q8NCP5 570 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 NELL1Q92832 810 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 HNRNPABQ99729 332 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 API5Q9BZZ5 524 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 ASXL3Q9C0F0 2248 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 RNF146Q9NTX7 359 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 CACNA2D2Q9NY47 1150 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 AKAP2Q9Y2D5 859 aa8.67□□□□□ -1.02
CTNNA1-227ENST00000521387 GOLGA8CPA6NN73 597 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 F5H6K3 240 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 LCE2BO14633 110 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 FSCN2O14926 492 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 RAD21O60216 631 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 DGKIO75912 1065 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 THPOP40225 353 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 ZAP70P43403 619 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 KLRC3Q07444 240 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 TDGQ13569 410 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 ZNF528Q3MIS6 628 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 BRDTQ58F21 947 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 KANK3Q6NY19 840 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 RASGRP4Q8TDF6 673 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 AFG1LQ8WV93 481 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 GATA6Q92908 595 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 CDCA3Q99618 268 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 ADAM7Q9H2U9 754 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 TBC1D17Q9HA65 648 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 GOPCQ9HD26 462 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 FBXL21Q9UKT6 434 aa8.66□□□□□ -1.02
CTNNA1-227ENST00000521387 PTPN13Q12923 2485 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 HAS3O00219 553 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 PPFIA3O75145 1194 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 UQCRFS1P1P0C7P4 283 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 HOXB8P17481 243 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 SPINK2P20155 84 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 ALDH5A1P51649 535 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 DSG2Q14126 1118 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 LLGL2Q6P1M3 1020 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 SERINC5Q86VE9 423 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 LRRC47Q8N1G4 583 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 ZNF454Q8N9F8 522 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 TDRD5Q8NAT2 981 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 BORCS6Q96GS4 357 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 TRERF1Q96PN7 1200 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 C1orf115Q9H7X2 142 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 KANSL2Q9H9L4 492 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 AAASQ9NRG9 546 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 MCM9Q9NXL9 1143 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 WNT16Q9UBV4 365 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 PLXNA4Q9HCM2 1894 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 KIAA1671Q9BY89 1806 aa8.65□□□□□ -1.02
CTNNA1-227ENST00000521387 FREM2Q5SZK8 3169 aa8.65□□□□□ -1.03
CTNNA1-227ENST00000521387 TTC3P53804 2025 aa8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 TEP1Q99973 2627 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-227ENST00000521387 ENPP3O14638 875 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms