RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 PLCG1P19174 1290 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 RRAGBQ5VZM2 374 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 KRT79Q5XKE5 535 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 HAUS3Q68CZ6 603 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 MAMDC4Q6UXC1 1216 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 IQUBQ8NA54 791 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 CNNM3Q8NE01 707 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 SNX29Q8TEQ0 813 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 USP6NLQ92738 828 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 CALML4Q96GE6 196 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 PNMA5Q96PV4 448 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 MPHOSPH6Q99547 160 aaKnown RBP9.57□□□□□ -0.88
VAPB-206ENST00000520497 FUCA2Q9BTY2 467 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 TEKT3Q9BXF9 490 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 PANK2Q9BZ23 570 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 UNC45AQ9H3U1 944 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 CUEDC2Q9H467 287 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 STK17AQ9UEE5 414 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 CCDC39Q9UFE4 941 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 STK24Q9Y6E0 443 aa9.57□□□□□ -0.88
VAPB-206ENST00000520497 TRIP12Q14669 1992 aaPredicted RBP9.57□□□□□ -0.88
VAPB-206ENST00000520497 MED24O75448 989 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 HOXC6P09630 235 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 SPATA31C1P0DKV0 1188 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 MUTP22033 750 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 RPA1P27694 616 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 CTGFP29279 349 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 STAT6P42226 847 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 PDE4DQ08499 809 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 POSTNQ15063 836 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 ECM1Q16610 540 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 NCAPH2Q6IBW4 605 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 KCNK18Q7Z418 384 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 CATSPER3Q86XQ3 398 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 CKAP2LQ8IYA6 745 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 KCTD17Q8N5Z5 321 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 ERMNQ8TAM6 284 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 SPATA20Q8TB22 786 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 MAML3Q96JK9 1138 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 MTRQ99707 1265 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 HSD17B14Q9BPX1 270 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 SENP7Q9BQF6 1050 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 POLR3CQ9BUI4 534 aaPredicted RBP9.56□□□□□ -0.88
VAPB-206ENST00000520497 KATNBL1Q9H079 304 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 NAT10Q9H0A0 1025 aaKnown RBP9.56□□□□□ -0.88
VAPB-206ENST00000520497 NT5C3AQ9H0P0 336 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 MAGEF1Q9HAY2 307 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 BLOC1S4Q9NUP1 217 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 KBTBD4Q9NVX7 518 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 KIAA1468Q9P260 1216 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 TUBE1Q9UJT0 475 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 SYNGAP1Q96PV0 1343 aa9.56□□□□□ -0.88
VAPB-206ENST00000520497 POTEB3A0JP26 581 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 CCNE2O96020 404 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 IGHA2P01877 340 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 TGFB3P10600 412 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 UBA1P22314 1058 aaKnown RBP9.55□□□□□ -0.88
VAPB-206ENST00000520497 CCT6AP40227 531 aaKnown RBP9.55□□□□□ -0.88
VAPB-206ENST00000520497 KRT76Q01546 638 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 SP2Q02086 613 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 MAP2K5Q13163 448 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 PNOCQ13519 176 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 EPHA7Q15375 998 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 STX1AQ16623 288 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 UVSSAQ2YD98 709 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 NT5DC1Q5TFE4 455 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 ZNF746Q6NUN9 644 aaPredicted RBP9.55□□□□□ -0.88
VAPB-206ENST00000520497 POTEBQ6S5H4 581 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 ARMCX2Q7L311 632 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 GRAMD1CQ8IYS0 662 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 CEP57L1Q8IYX8 460 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 MSL3Q8N5Y2 521 aaKnown RBP9.55□□□□□ -0.88
VAPB-206ENST00000520497 RDM1Q8NG50 284 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 RASSF8Q8NHQ8 419 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 NPLOC4Q8TAT6 608 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 ERCC4Q92889 916 aaPredicted RBP9.55□□□□□ -0.88
VAPB-206ENST00000520497 PAGE5Q96GU1 130 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 EIF2AK1Q9BQI3 630 aaKnown RBP9.55□□□□□ -0.88
VAPB-206ENST00000520497 TUFT1Q9NNX1 390 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 ANO10Q9NW15 660 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 PKD2L1Q9P0L9 805 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 GJD2Q9UKL4 321 aa9.55□□□□□ -0.88
VAPB-206ENST00000520497 TNRC18O15417 2968 aaPredicted RBP9.55□□□□□ -0.88
VAPB-206ENST00000520497 SIP14410 1827 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 RBM47A0AV96 593 aaKnown RBP9.54□□□□□ -0.88
VAPB-206ENST00000520497 POTEFA5A3E0 1075 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 DDX39AO00148 427 aaKnown RBP9.54□□□□□ -0.88
VAPB-206ENST00000520497 CHMP2AO43633 222 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 GTPBP6O43824 516 aaPredicted RBP9.54□□□□□ -0.88
VAPB-206ENST00000520497 SLITRK3O94933 977 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 ARIH2O95376 493 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 MYL1P05976 194 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 SFNP31947 248 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 SARSP49591 514 aaKnown RBP9.54□□□□□ -0.88
VAPB-206ENST00000520497 JAK3P52333 1124 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 LACTBP83111 547 aaPredicted RBP9.54□□□□□ -0.88
VAPB-206ENST00000520497 DPYDQ12882 1025 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 IRF5Q13568 498 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 CCDC62Q6P9F0 684 aa9.54□□□□□ -0.88
VAPB-206ENST00000520497 KCNV1Q6PIU1 500 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms