RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 FAM47E-STBD1D6RA91 191 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 AQP7O14520 342 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 SLPIP03973 132 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 CNR2P34972 360 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 GDF5P43026 501 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 KCNT2Q6UVM3 1135 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 OTOP3Q7RTS5 596 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 FERMT3Q86UX7 667 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 JAZF1Q86VZ6 243 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 ZFPM1Q8IX07 1006 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 TTLL11Q8NHH1 800 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 DDX1Q92499 740 aaKnown RBP5.87□□□□□ -1.47
SQLE-204ENST00000520493 KCNJ15Q99712 375 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 CDIP1Q9H305 208 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 L2HGDHQ9H9P8 463 aa5.87□□□□□ -1.47
SQLE-204ENST00000520493 SLC27A2O14975 620 aa5.86□□□□□ -1.47
SQLE-204ENST00000520493 SOD2P04179 222 aa5.86□□□□□ -1.47
SQLE-204ENST00000520493 CYP1A1P04798 512 aaPredicted RBP5.86□□□□□ -1.47
SQLE-204ENST00000520493 NAT1P18440 290 aa5.86□□□□□ -1.47
SQLE-204ENST00000520493 SUMO1P63165 101 aaKnown RBP5.86□□□□□ -1.47
SQLE-204ENST00000520493 NTRK3Q16288 839 aa5.86□□□□□ -1.47
SQLE-204ENST00000520493 YOD1Q5VVQ6 348 aaPredicted RBP5.86□□□□□ -1.47
SQLE-204ENST00000520493 MCTP2Q6DN12 878 aa5.86□□□□□ -1.47
SQLE-204ENST00000520493 VASNQ6EMK4 673 aa5.86□□□□□ -1.47
SQLE-204ENST00000520493 SPATC1Q76KD6 591 aa5.86□□□□□ -1.47
SQLE-204ENST00000520493 MAMDC2Q7Z304 686 aaPredicted RBP5.86□□□□□ -1.47
SQLE-204ENST00000520493 LGI4Q8N135 537 aa5.86□□□□□ -1.47
SQLE-204ENST00000520493 LCORQ96JN0 433 aaPredicted RBP5.86□□□□□ -1.47
SQLE-204ENST00000520493 SYT3Q9BQG1 590 aa5.86□□□□□ -1.47
SQLE-204ENST00000520493 PPARGC1AQ9UBK2 798 aaKnown RBP5.86□□□□□ -1.47
SQLE-204ENST00000520493 PFDN2Q9UHV9 154 aa5.86□□□□□ -1.47
SQLE-204ENST00000520493 SBNO2Q9Y2G9 1366 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 TRBV23-1A0A0A0MS06 115 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 BLACEA4D250 179 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 MROH6A6NGR9 719 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 DDX3XO00571 662 aaKnown RBP eCLIP5.85□□□□□ -1.47
SQLE-204ENST00000520493 LRG1P02750 347 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 C6P13671 934 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 ADAM9Q13443 819 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 MTDHQ86UE4 582 aaKnown RBP5.85□□□□□ -1.47
SQLE-204ENST00000520493 JMYQ8N9B5 988 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 UHMK1Q8TAS1 419 aaKnown RBP5.85□□□□□ -1.47
SQLE-204ENST00000520493 ZSWIM3Q96MP5 696 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 SMPD4Q9NXE4 827 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 FTSJ1Q9UET6 329 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 CROTQ9UKG9 612 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 DSEQ9UL01 958 aa5.85□□□□□ -1.47
SQLE-204ENST00000520493 MRPL42Q9Y6G3 142 aaKnown RBP5.85□□□□□ -1.47
SQLE-204ENST00000520493 C9orf118A6NHY6 69 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 GRIN1Q05586 938 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 PAK1Q13153 545 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 TUSC3Q13454 348 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 PLEKHG4Q58EX7 1191 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 PRR31Q5SQ13 230 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 TMC5Q6UXY8 1006 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 EP400NLQ6ZTU2 488 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 PLEKHH3Q7Z736 793 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 ANKRD13AQ8IZ07 590 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 ZBTB38Q8NAP3 1195 aaPredicted RBP5.84□□□□□ -1.47
SQLE-204ENST00000520493 TXNDC5Q8NBS9 432 aaKnown RBP5.84□□□□□ -1.47
SQLE-204ENST00000520493 PTPRN2Q92932 1015 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 RNPC3Q96LT9 517 aaKnown RBP5.84□□□□□ -1.47
SQLE-204ENST00000520493 TMEM168Q9H0V1 697 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 HSPBP1Q9NZL4 362 aa5.84□□□□□ -1.47
SQLE-204ENST00000520493 FAM221BA6H8Z2 402 aa5.83□□□□□ -1.48
SQLE-204ENST00000520493 COL6A2P12110 1019 aa5.83□□□□□ -1.48
SQLE-204ENST00000520493 ZNF28P17035 718 aa5.83□□□□□ -1.48
SQLE-204ENST00000520493 SURF1Q15526 300 aa5.83□□□□□ -1.48
SQLE-204ENST00000520493 LONRF2Q1L5Z9 754 aa5.83□□□□□ -1.48
SQLE-204ENST00000520493 ZC3H12BQ5HYM0 836 aaKnown RBP5.83□□□□□ -1.48
SQLE-204ENST00000520493 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.83□□□□□ -1.48
SQLE-204ENST00000520493 BRINP2Q9C0B6 783 aa5.83□□□□□ -1.48
SQLE-204ENST00000520493 IPPKQ9H8X2 491 aa5.83□□□□□ -1.48
SQLE-204ENST00000520493 DLL4Q9NR61 685 aa5.83□□□□□ -1.48
SQLE-204ENST00000520493 DUSP10Q9Y6W6 482 aa5.83□□□□□ -1.48
SQLE-204ENST00000520493 KDM2BQ8NHM5 1336 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 GSTA4O15217 222 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 ADCY3O60266 1144 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 FBXO21O94952 628 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 FAHP16930 419 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 TGM1P22735 817 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 IL13P35225 146 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 GABREP78334 506 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 PAN2Q504Q3 1202 aaKnown RBP5.82□□□□□ -1.48
SQLE-204ENST00000520493 TRMT10BQ6PF06 316 aaKnown RBP5.82□□□□□ -1.48
SQLE-204ENST00000520493 KCTD1Q719H9 257 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 NLGN4XQ8N0W4 816 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 APPBP2Q92624 585 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 BARX1Q9HBU1 254 aaPredicted RBP5.82□□□□□ -1.48
SQLE-204ENST00000520493 TRAF6Q9Y4K3 522 aa5.82□□□□□ -1.48
SQLE-204ENST00000520493 ZNF536O15090 1300 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 NKRFO15226 690 aaKnown RBP eCLIP5.81□□□□□ -1.48
SQLE-204ENST00000520493 PLATP00750 562 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 ENO2P09104 434 aaPredicted RBP5.81□□□□□ -1.48
SQLE-204ENST00000520493 ST5P78524 1137 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 GUCY1A3Q02108 690 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 HABP4Q5JVS0 413 aaKnown RBP5.81□□□□□ -1.48
SQLE-204ENST00000520493 FAM209AQ5JX71 171 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 ZNF662Q6ZS27 426 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 HOMER1Q86YM7 354 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms