RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 ZNF577Q9BSK1 485 aa16.11■□□□□ 0.17
VEGFA-221ENST00000520265 C22orf23Q9BZE7 217 aa16.11■□□□□ 0.17
VEGFA-221ENST00000520265 PCDHA4Q9UN74 947 aa16.11■□□□□ 0.17
VEGFA-221ENST00000520265 FAM86B1E9PN63 330 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 FAM86B2P0C5J1 330 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 GNAT1P11488 350 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 THPOP40225 353 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 ACTR2P61160 394 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 PTK7Q13308 1070 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 ME3Q16798 604 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 ZNF697Q5TEC3 545 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 LRRC8DQ7L1W4 858 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 AFAP1L1Q8TED9 768 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 GTF3C6Q969F1 213 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 SETD4Q9NVD3 440 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 ERAP1Q9NZ08 941 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 TRPC6Q9Y210 931 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 SAMM50Q9Y512 469 aa16.1■□□□□ 0.17
VEGFA-221ENST00000520265 CCDC194A0A1B0GVG4 234 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 IPO5O00410 1097 aaKnown RBP16.09■□□□□ 0.17
VEGFA-221ENST00000520265 MEIS1O00470 390 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 CTSHP09668 335 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 IQCF3P0C7M6 154 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 ACTN1P12814 892 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 SELPP16109 830 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 PPFIA1Q13136 1202 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 ITGB3BPQ13352 177 aaPredicted RBP16.09■□□□□ 0.17
VEGFA-221ENST00000520265 TRIM29Q14134 588 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 C16orf59Q7L2K0 433 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 NIPA1Q7RTP0 329 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 TBCKQ8TEA7 893 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 SMARCAD1Q9H4L7 1026 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 BRMS1Q9HCU9 246 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 STK36Q9NRP7 1315 aa16.09■□□□□ 0.17
VEGFA-221ENST00000520265 TANC1Q9C0D5 1861 aa16.08■□□□□ 0.17
VEGFA-221ENST00000520265 SCN5AQ14524 2016 aa16.08■□□□□ 0.16
VEGFA-221ENST00000520265 GSTTP1A0A1W2PQM5 241 aa16.08■□□□□ 0.16
VEGFA-221ENST00000520265 TREHO43280 583 aa16.08■□□□□ 0.16
VEGFA-221ENST00000520265 PFKMP08237 780 aa16.08■□□□□ 0.16
VEGFA-221ENST00000520265 CKBP12277 381 aa16.08■□□□□ 0.16
VEGFA-221ENST00000520265 RFC2P35250 354 aa16.08■□□□□ 0.16
VEGFA-221ENST00000520265 TRMT1LQ7Z2T5 733 aaKnown RBP16.08■□□□□ 0.16
VEGFA-221ENST00000520265 CKAP2LQ8IYA6 745 aa16.08■□□□□ 0.16
VEGFA-221ENST00000520265 DHX38Q92620 1227 aaKnown RBP16.08■□□□□ 0.16
VEGFA-221ENST00000520265 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
VEGFA-221ENST00000520265 NFASCO94856 1347 aa16.08■□□□□ 0.16
VEGFA-221ENST00000520265 LAMA3Q16787 3333 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-221ENST00000520265 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-221ENST00000520265 GRXCR1A8MXD5 290 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 CHMP2AO43633 222 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 JAK2O60674 1132 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 CTDNEP1O95476 244 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 CYP3A4P08684 503 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 SMAD3P84022 425 aaKnown RBP16.07■□□□□ 0.16
VEGFA-221ENST00000520265 HIC1Q14526 733 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 NONOQ15233 471 aaKnown RBP eCLIP16.07■□□□□ 0.165e-6■□□□□ 9.8
VEGFA-221ENST00000520265 FAM160B1Q5W0V3 765 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 GALNT17Q6IS24 598 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 MIS18BP1Q6P0N0 1132 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 KRT25Q7Z3Z0 450 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 CCDC83Q8IWF9 413 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 LMBR1Q8WVP7 490 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 HERVK_113Q902F9 699 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 WNT8BQ93098 351 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 GJB4Q9NTQ9 266 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 CXXC1Q9P0U4 656 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-221ENST00000520265 LIMCH1Q9UPQ0 1083 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 SLC4A7Q9Y6M7 1214 aa16.07■□□□□ 0.16
VEGFA-221ENST00000520265 TRIP12Q14669 1992 aaPredicted RBP16.07■□□□□ 0.16
VEGFA-221ENST00000520265 EMSYQ7Z589 1322 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 NRCAMQ92823 1304 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 IGLV3-22A0A075B6J6 115 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 KCNJ6P48051 423 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 STAT5BP51692 787 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 GRIK4Q16099 956 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 INF2Q27J81 1249 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 LETM2Q2VYF4 491 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 ZNF618Q5T7W0 954 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 FAM109BQ6ICB4 259 aaPredicted RBP16.06■□□□□ 0.16
VEGFA-221ENST00000520265 SERINC5Q86VE9 423 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 CTAGE1Q96RT6 745 aa16.06■□□□□ 0.16
VEGFA-221ENST00000520265 RSPH10B2B2RC85 870 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 MARCH6O60337 910 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 GAS7O60861 476 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 TDP2O95551 362 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 CCNE2O96020 404 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 RSPH10BP0C881 870 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 DNAJB2P25686 324 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 KRT2P35908 639 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 PDXDC2PQ6P474 469 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 PIK3AP1Q6ZUJ8 805 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 DAGLBQ8NCG7 672 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 NSUN7Q8NE18 718 aaKnown RBP16.05■□□□□ 0.16
VEGFA-221ENST00000520265 TNPO1Q92973 898 aaKnown RBP16.05■□□□□ 0.16
VEGFA-221ENST00000520265 IL17RAQ96F46 866 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 PHF20Q9BVI0 1012 aa16.05■□□□□ 0.16
VEGFA-221ENST00000520265 FAM49AQ9H0Q0 323 aaPredicted RBP16.05■□□□□ 0.16
VEGFA-221ENST00000520265 ZNF302Q9NR11 478 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms