RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 CHMP2AO43633 222 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 CASP1P29466 404 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 RFC4P35249 363 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 MMEL1Q495T6 779 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 ITIH6Q6UXX5 1313 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 NRBF2Q96F24 287 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 ANKZF1Q9H8Y5 726 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 GPCPD1Q9NPB8 672 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 NCKAP5LQ9HCH0 1330 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 ARHGEF35A5YM69 484 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 TRIM49BA6NDI0 452 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 DDAH1O94760 285 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 LARP4BQ92615 738 aaKnown RBP13.19□□□□□ -0.3
SHPRH-207ENST00000519632 FAM210AQ96ND0 272 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 CHP1Q99653 195 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 SATB2Q9UPW6 733 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 TTC4O95801 387 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 GCP02774 474 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 NR2F2P24468 414 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
SHPRH-207ENST00000519632 TRIP13Q15645 432 aaPredicted RBP13.19□□□□□ -0.3
SHPRH-207ENST00000519632 B4GALNT2Q8NHY0 566 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
SHPRH-207ENST00000519632 DENND2AQ9ULE3 1009 aa13.19□□□□□ -0.3
SHPRH-207ENST00000519632 PABPN1LA6NDY0 278 aaKnown RBP13.18□□□□□ -0.3
SHPRH-207ENST00000519632 FOXN1O15353 648 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 DAPK3O43293 454 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 LPIN2Q92539 896 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 ZKSCAN4Q969J2 545 aaPredicted RBP13.18□□□□□ -0.3
SHPRH-207ENST00000519632 TRIM10Q9UDY6 481 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 ZBTB21Q9ULJ3 1066 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 TSC22D4Q9Y3Q8 395 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 ATP6V1G2O95670 118 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 IL2RBP14784 551 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 PDE6AP16499 860 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 LRRC41Q15345 812 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 NLRP3Q96P20 1036 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 MCF2P10911 925 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 TMED10P49755 219 aaKnown RBP13.18□□□□□ -0.3
SHPRH-207ENST00000519632 FXR1P51114 621 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHPRH-207ENST00000519632 KAZNQ674X7 775 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 ATG16L1Q676U5 607 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 RBM43Q6ZSC3 357 aaKnown RBP13.18□□□□□ -0.3
SHPRH-207ENST00000519632 RASSF3Q86WH2 238 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 GPKOWQ92917 476 aaPredicted RBP eCLIP13.18□□□□□ -0.32e-8■■■■■ 52.2
SHPRH-207ENST00000519632 CEP72Q9P209 647 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 TUBE1Q9UJT0 475 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 GSTA2P09210 222 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 OCA2Q04671 838 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 MED21Q13503 144 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 NBPF20Q3BBV1 942 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 ARHGAP22Q7Z5H3 698 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 DTX3LQ8TDB6 740 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 PALMDQ9NP74 551 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 GPHNQ9NQX3 736 aaPredicted RBP13.18□□□□□ -0.3
SHPRH-207ENST00000519632 DCTN4Q9UJW0 460 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 PNMA2Q9UL42 364 aa13.18□□□□□ -0.3
SHPRH-207ENST00000519632 GFPT2O94808 682 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 NQO1P15559 274 aaKnown RBP13.17□□□□□ -0.3
SHPRH-207ENST00000519632 SNX16P57768 344 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 FMR1Q06787 632 aaKnown RBP eCLIP13.17□□□□□ -0.3
SHPRH-207ENST00000519632 PREPLQ4J6C6 727 aaPredicted RBP13.17□□□□□ -0.3
SHPRH-207ENST00000519632 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 OR2W6PQ8NHA6 318 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 CFAP69A5D8W1 941 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 FAM187AA6NFU0 413 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 FSBPO95073 299 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 PLCG2P16885 1265 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 EEF1B2P24534 225 aaKnown RBP13.17□□□□□ -0.3
SHPRH-207ENST00000519632 PRCPP42785 496 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 COPS2P61201 443 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 LRRC63Q05C16 580 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 STAG2Q8N3U4 1231 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 TAB3Q8N5C8 712 aaPredicted RBP13.17□□□□□ -0.3
SHPRH-207ENST00000519632 SDCCAG3Q96C92 435 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 CCDC138Q96M89 665 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 UIMC1Q96RL1 719 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 PFDN4Q9NQP4 134 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 LIMA1Q9UHB6 759 aaKnown RBP13.17□□□□□ -0.3
SHPRH-207ENST00000519632 NOC2LQ9Y3T9 749 aaKnown RBP13.17□□□□□ -0.3
SHPRH-207ENST00000519632 CPSF1Q10570 1443 aaKnown RBP13.17□□□□□ -0.3
SHPRH-207ENST00000519632 GOLGA8QA0A0J9YX86 632 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 GOLGA8OA6NCC3 632 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 GOLGA8NF8WBI6 632 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 MCF2LO15068 1137 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 KDM1AO60341 852 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 ARFIP2P53365 341 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 PICALMQ13492 652 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
SHPRH-207ENST00000519632 IWS1Q96ST2 819 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 SMYD3Q9H7B4 428 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 RAB21Q9UL25 225 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 SYNGAP1Q96PV0 1343 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 TTC37Q6PGP7 1564 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 MAGEA13PA6NCF6 341 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 PRPF31Q8WWY3 499 aaKnown RBP13.17□□□□□ -0.3
SHPRH-207ENST00000519632 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
SHPRH-207ENST00000519632 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms