RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 SHTN1A0MZ66 631 aa12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 USP17L10C9JJH3 530 aa12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 PPP1R11O60927 126 aaPredicted RBP12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 MAGEA9P43362 315 aa12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 TNNC1P63316 161 aa12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 ARID5AQ03989 594 aa12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 TTBK2Q6IQ55 1244 aa12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 FOXR1Q6PIV2 292 aa12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 CRAMP1Q96RY5 1269 aa12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 PCDHGC5Q9Y5F6 944 aa12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 PCDHA2Q9Y5H9 948 aa12.46□□□□□ -0.41
NUDCD1-203ENST00000519607 TRIM66O15016 1216 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 TLR2O60603 784 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 NR2F2P24468 414 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 SLC16A2P36021 539 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 KCNH2Q12809 1159 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 CFAP58Q5T655 872 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 MEI1Q5TIA1 1274 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 MOXD1Q6UVY6 613 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 KCTD1Q719H9 257 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 FRMD5Q7Z6J6 570 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 GPIHBP1Q8IV16 184 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 FAM133AQ8N9E0 248 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 SCFD1Q8WVM8 642 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 SPAG5Q96R06 1193 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 KCTD10Q9H3F6 313 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 GDF3Q9NR23 364 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 USP40Q9NVE5 1235 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 ADAMTS1Q9UHI8 967 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 PCDHA1Q9Y5I3 950 aa12.46□□□□□ -0.42
NUDCD1-203ENST00000519607 KIF13BQ9NQT8 1826 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 CYP3A7-CYP3A51PA0A087WV96 503 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 POTEB3A0JP26 581 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 BTNL10A8MVZ5 291 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 POTECB2RU33 542 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 F8W031 263 aaPredicted RBP12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 EBAG9O00559 213 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 CES2O00748 559 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 CALUO43852 315 aaPredicted RBP12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 HEXIM1O94992 359 aaKnown RBP12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 CYP11B2P19099 503 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 CYP3A7P24462 503 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 KLRC1P26715 233 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 HOXA10P31260 410 aaPredicted RBP12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 IRAK1P51617 712 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 AP3B2Q13367 1082 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 POTEBQ6S5H4 581 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 VPS36Q86VN1 386 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 PPM1EQ8WY54 764 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 MS4A14Q96JA4 679 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 EPB41L5Q9HCM4 733 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 KCNMB3Q9NPA1 279 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 SMARCAL1Q9NZC9 954 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 EHD2Q9NZN4 543 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 ARMCX3Q9UH62 379 aaPredicted RBP12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 DNM3Q9UQ16 869 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 A0A087X0T9 212 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 FAM228BP0C875 321 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 CORO7P57737 925 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 GUCY2DQ02846 1103 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 CLEC10AQ8IUN9 316 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 ZC3H3Q8IXZ2 948 aaKnown RBP12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 WHAMMQ8TF30 809 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 IFT81Q8WYA0 676 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 GJA10Q969M2 543 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 MXD3Q9BW11 206 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 ANO3Q9BYT9 981 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 ZC3H12CQ9C0D7 883 aaKnown RBP12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 PLCB1Q9NQ66 1216 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 HDAC9Q9UKV0 1011 aa12.45□□□□□ -0.42
NUDCD1-203ENST00000519607 FRMD3A2A2Y4 597 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 USP17L15C9J2P7 530 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 USP17L13C9JLJ4 530 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 USP17L11C9JVI0 530 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 USP17L18D6R9N7 530 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 USP17L22D6RA61 530 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 USP17L17D6RBQ6 530 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 TBX3O15119 743 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 RAD21O60216 631 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 FTCDO95954 541 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 AFPP02771 609 aaKnown RBP12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 XRCC5P13010 732 aaKnown RBP12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 RPL13P26373 211 aaKnown RBP12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 SHMT1P34896 483 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 MRPS25P82663 173 aaKnown RBP12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 RPS6KA1Q15418 735 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 ENOX2Q16206 610 aaKnown RBP12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 KNOP1Q1ED39 458 aaKnown RBP12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 USP17L6PQ6QN14 398 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 SP8Q8IXZ3 490 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 EFCAB13Q8IY85 973 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 LMBR1Q8WVP7 490 aa12.44□□□□□ -0.42
NUDCD1-203ENST00000519607 DHX36Q9H2U1 1008 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms