RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 VWA3AA6NCI4 1184 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 GOLGA6L22H0YM25 854 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 DYNC1LI2O43237 492 aaPredicted RBP10.66□□□□□ -0.7
CLN8-203ENST00000518780 PSAPP07602 524 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 GJB1P08034 283 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 CCND3P30281 292 aaPredicted RBP10.66□□□□□ -0.7
CLN8-203ENST00000518780 TXLNAP40222 546 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 TECP42680 631 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 ME1P48163 572 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 ACTR2P61160 394 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 DGKDQ16760 1214 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 FOXD4L6Q3SYB3 417 aaPredicted RBP10.66□□□□□ -0.7
CLN8-203ENST00000518780 ABHD15Q6UXT9 468 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 FOXD4L3Q6VB84 417 aaPredicted RBP10.66□□□□□ -0.7
CLN8-203ENST00000518780 PLPPR4Q7Z2D5 763 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 MIER3Q7Z3K6 550 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 RNF180Q86T96 592 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 TLK2Q86UE8 772 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 TMEM87AQ8NBN3 555 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 PCSK9Q8NBP7 692 aaKnown RBP10.66□□□□□ -0.7
CLN8-203ENST00000518780 GPR20Q99678 358 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 PYM1Q9BRP8 204 aaKnown RBP10.66□□□□□ -0.7
CLN8-203ENST00000518780 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
CLN8-203ENST00000518780 FTOQ9C0B1 505 aaKnown RBP eCLIP10.66□□□□□ -0.7
CLN8-203ENST00000518780 XPNPEP3Q9NQH7 507 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 DISC1Q9NRI5 854 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 LRWD1Q9UFC0 647 aa10.66□□□□□ -0.7
CLN8-203ENST00000518780 FBXO2Q9UK22 296 aaPredicted RBP10.66□□□□□ -0.7
CLN8-203ENST00000518780 ZNFX1Q9P2E3 1918 aaKnown RBP10.66□□□□□ -0.7
CLN8-203ENST00000518780 DOCK3Q8IZD9 2030 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 IGKV6D-21A0A0A0MT36 114 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 A0A1W2PQ27 194 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 A0A1W2PQ64 194 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 A0A1W2PQD8 194 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 GOLGA6L4A6NEF3 574 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 CABYRO75952 493 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 P4HBP07237 508 aaKnown RBP10.65□□□□□ -0.7
CLN8-203ENST00000518780 XRCC6P12956 609 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLN8-203ENST00000518780 CCL5P13501 91 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 CMA1P23946 247 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 MARCKSP29966 332 aaPredicted RBP10.65□□□□□ -0.7
CLN8-203ENST00000518780 UBA7P41226 1012 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 HSDL1Q3SXM5 330 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 FAM160B1Q5W0V3 765 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 KRT79Q5XKE5 535 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 LHX8Q68G74 356 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 AFAP1L1Q8TED9 768 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 AFG1LQ8WV93 481 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 ATP6V0A1Q93050 837 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 HSD17B14Q9BPX1 270 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 POLR3CQ9BUI4 534 aaPredicted RBP10.65□□□□□ -0.7
CLN8-203ENST00000518780 SEZ6LQ9BYH1 1024 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 CCSER1Q9C0I3 900 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 MCOLN1Q9GZU1 580 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 NT5C3AQ9H0P0 336 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 RNF208Q9H0X6 261 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 UNC45AQ9H3U1 944 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 SMARCAD1Q9H4L7 1026 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 AZI2Q9H6S1 392 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 TUFT1Q9NNX1 390 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 PKD2L1Q9P0L9 805 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 PCDHA7Q9UN72 937 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 SAMM50Q9Y512 469 aa10.65□□□□□ -0.7
CLN8-203ENST00000518780 LCTP09848 1927 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 EMSYQ7Z589 1322 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 KDM3AQ9Y4C1 1321 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 GSTTP1A0A1W2PQM5 241 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 MOXD2PA6NHM9 499 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 ADAMTS4O75173 837 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 LGR5O75473 907 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 LYPLA2O95372 231 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 CCNE2O96020 404 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 MMP3P08254 477 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 SUPT20HL2P0C7V6 817 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 PTMSP20962 102 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 RPA1P27694 616 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 TCF7P36402 384 aaPredicted RBP10.64□□□□□ -0.71
CLN8-203ENST00000518780 QARSP47897 775 aaKnown RBP10.64□□□□□ -0.71
CLN8-203ENST00000518780 PSMC5P62195 406 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 IL17AQ16552 155 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 FSCN1Q16658 493 aaKnown RBP10.64□□□□□ -0.71
CLN8-203ENST00000518780 GNASQ5JWF2 1037 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 HYIQ5T013 277 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 AXDND1Q5T1B0 1012 aaPredicted RBP10.64□□□□□ -0.71
CLN8-203ENST00000518780 NCAPH2Q6IBW4 605 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 KLHDC9Q8NEP7 349 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 COPS5Q92905 334 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 KATNAL1Q9BW62 490 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 CSRNP2Q9H175 543 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 UNC93B1Q9H1C4 597 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 ZSWIM4Q9H7M6 989 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 FAM13BQ9NYF5 915 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 CCDC39Q9UFE4 941 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 ZNF215Q9UL58 517 aaPredicted RBP10.64□□□□□ -0.71
CLN8-203ENST00000518780 OGDHLQ9ULD0 1010 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 MAFBQ9Y5Q3 323 aaPredicted RBP10.64□□□□□ -0.71
CLN8-203ENST00000518780 PLXNA1Q9UIW2 1896 aa10.64□□□□□ -0.71
CLN8-203ENST00000518780 SYNRGQ9UMZ2 1314 aa10.63□□□□□ -0.71
CLN8-203ENST00000518780 DDX39AO00148 427 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms